DBTMEE

DBTMEE:2005330

Gene

Cul4b

Synonyms

Description

cullin 4B

Locus

NM_001110142 UCSC: chrX:35884798-35929373(-) OLP: chrX:35884798-35929373(-)
NM_028288 UCSC: chrX:35884798-35929373(-) OLP: chrX:35884798-35929373(-)

DB links

Entrez 72584
MGI 1919834

Feature

protein-coding

GO_BP

8 Terms

GO_MF

2 Terms

GO_CC

6 Terms

KEGG

2 Terms

Ver2_FPKM

Log10 (FPKM+1)

0.875

SPR

2.017

2.312

1.927

1.559

1.614

ESC

1.528

MEF

2.058

p1C

1.69

p4C

1.635

iPSC

DBTMEE	Gene	RefSeq	Entrez	SPR_FPKM	Oo_FPKM	1C_FPKM	2C_FPKM	4C_FPKM	ESC_FPKM	MEF_FPKM	p1C_FPKM	p4C_FPKM	iPSC_FPKM
2005330 (v2.0)	Cul4b	NM_001110142,NM_028288	72584	6.49056	103.108	204.112	83.5138	35.2555	40.1495	32.7199	113.404	47.9343	42.1079

SPR_Histone_Erkek_5KaroundTSS

Enrichment of Histone Variant and Modification (+/- 5Kb from TSS)

0.245

H3.3
Rep.1

0.269

H3.3
Rep.2

3.3

H3K4me3
Rep.1

3.264

H3K4me3
Rep.2

-0.334

H3K27me3
Rep.1

-0.34

H3K27me3
Rep.2

DBTMEE	Gene	Entrez	H3.3_1_ChIP/Input	H3.3_1(Enrich; log2)	H3.3_2_ChIP/Input	H3.3_2(Enrich; log2)	H3K4me3_1_ChIP/Input	H3K4me3_1(Enrich; log2)	H3K4me3_2_ChIP/Input	H3K4me3_2(Enrich; log2)	H3K27me3_1_ChIP/Input	H3K27me3_1(Enrich; log2)	H3K27me3_2_ChIP/Input	H3K27me3_2(Enrich; log2)
2005330 (v2.0)	Cul4b	72584	286/169	0.2448	221/169	0.2694	146/169	3.2998	654/169	3.2644	32/169	-0.3338	202/169	-0.3398

SPR_Histone_Erkek_2KaroundTSS

Enrichment of Histone Variant and Modification (+/- 2Kb from TSS)

0.565

H3.3
Rep.1

0.358

H3.3
Rep.2

4.442

H3K4me3
Rep.1

4.459

H3K4me3
Rep.2

-0.49

H3K27me3
Rep.1

-0.408

H3K27me3
Rep.2

DBTMEE	Gene	Entrez	H3.3_1_ChIP/Input	H3.3_1(Enrich; log2)	H3.3_2_ChIP/Input	H3.3_2(Enrich; log2)	H3K4me3_1_ChIP/Input	H3K4me3_1(Enrich; log2)	H3K4me3_2_ChIP/Input	H3K4me3_2(Enrich; log2)	H3K27me3_1_ChIP/Input	H3K27me3_1(Enrich; log2)	H3K27me3_2_ChIP/Input	H3K27me3_2(Enrich; log2)
2005330 (v2.0)	Cul4b	72584	140/66	0.565	92/66	0.3582	139/66	4.4425	598/66	4.4593	11/66	-0.4899	75/66	-0.4078

SPR_Methy_Kobayashi_5KaroundTSS

DBTMEE	Gene	Entrez	Total_mC_levels	Number_of_mCs	Averaged_Methylation_level
2005330 (v2.0)	Cul4b	72584	30.2721	55	55.04

SPR_Methy_Kobayashi_2KaroundTSS

DBTMEE	Gene	Entrez	Total_mC_levels	Number_of_mCs	Averaged_Methylation_level
2005330 (v2.0)	Cul4b	72584	9.1361	33	27.69

SOLiD_OocyteTo4C_FPKM_gene_guided

N/A

SOLiD_Illumina_Oo_1C_Sperm_FPKM_gene_guided

N/A

SOLiD_Partheno1C_FPKM_gene_guided

N/A

SOLiD_Illumina_Oo_p1C_Sperm_FPKM_gene_guided

N/A

SOLiD_Partheno4C_FPKM_gene_guided

N/A

Illumina_Oo_2C_FPKM_gene_guided

N/A

SOLiD_SC_Oo_REPLICA_FPKM_gene_guided

N/A

NIA60mer

DBTMEE	Array_Feature_Number	Oligo_Parent_Clone	Unigene	Gene	Entrez	U_Cluster	NAP_Cluster	Gene_U/NAP	TIGR	SwissProt	EST	Oo	1C	2C	4C	8C	Morula	Blastocyst
0005392 (v1.0)	4774	G0104F08-3	Mm.26885	Cul4b	72584	U039328	NAP031678-1	Cul4b;	TC909147	Q9CZM5	U,F,2	4.2855	4.3672	3.3095	3.1027	3.144	3.3326	3.6304
0005392 (v1.0)	8994	H3075B06-3	Mm.26885	Cul4b	72584	U039328	NAP098810-001	Cul4b;	TC909150,TC909148,TC909147	Q9CZM5	U,F,2	3.4617	3.4172	3.3818	3.5909	3.0811	3.3482	3.3955

MOE430

N/A

Agilent44K

N/A

Proteome

N/A