| Gene | Esrrb |
| Synonyms | ERR2
ERRb
Estrrb |
| Description | estrogen related receptor, beta |
| Locus | NM_001159500 UCSC: chr12:87702067-87862578(+) OLP: chr12:87702067-87862578(+)
NM_011934 UCSC: chr12:87762594-87862578(+) OLP: chr12:87762594-87862578(+)
|
| DB links |
Entrez 26380
MGI 1346832
Ensembl ENSMUSG00000021255
Vega OTTMUSG00000023036
|
| Feature | protein-coding |
| GO_BP |
-
 9 Terms
in utero embryonic development (GO:0001701)
trophectodermal cellular morphogenesis (GO:0001831)
trophectodermal cell proliferation (GO:0001834)
embryonic placenta development (GO:0001892)
transcription, DNA-templated (GO:0006351)
regulation of transcription, DNA-templated (GO:0006355)
stem cell maintenance (GO:0019827)
steroid hormone mediated signaling pathway (GO:0043401)
positive regulation of transcription from RNA polymerase II promoter (GO:0045944)
|
| GO_MF |
-
11 Terms
|
| GO_CC |
-
1 Terms
|
| KEGG | |
| Ver2_FPKM |
| DBTMEE | Gene | RefSeq | Entrez | SPR_FPKM | Oo_FPKM | 1C_FPKM | 2C_FPKM | 4C_FPKM | ESC_FPKM | MEF_FPKM | p1C_FPKM | p4C_FPKM | iPSC_FPKM |
|---|
2006834
(v2.0) | Esrrb | NM_001159500,NM_011934 | 26380
| 0.049906 | 14.2427 | 6.00475 | 16.638 | 31.136 | 121.763 | 0.00908947 | 7.22257 | 25.3617 | 92.395 |
|
| SPR_Histone_Erkek_5KaroundTSS |
Enrichment of Histone Variant and Modification (+/- 5Kb from TSS)
| DBTMEE | Gene | Entrez | H3.3_1_ChIP/Input | H3.3_1(Enrich; log2) | H3.3_2_ChIP/Input | H3.3_2(Enrich; log2) | H3K4me3_1_ChIP/Input | H3K4me3_1(Enrich; log2) | H3K4me3_2_ChIP/Input | H3K4me3_2(Enrich; log2) | H3K27me3_1_ChIP/Input | H3K27me3_1(Enrich; log2) | H3K27me3_2_ChIP/Input | H3K27me3_2(Enrich; log2) |
|---|
2006834
(v2.0) | Esrrb | 26380
| 650/510 | -0.1625 | 407/510 | -0.4407 | 14/510 | -1.5203 | 64/510 | -1.6478 | 198/510 | 0.6883 | 1679/510 | 1.1182 |
|
| SPR_Histone_Erkek_2KaroundTSS |
Enrichment of Histone Variant and Modification (+/- 2Kb from TSS)
| DBTMEE | Gene | Entrez | H3.3_1_ChIP/Input | H3.3_1(Enrich; log2) | H3.3_2_ChIP/Input | H3.3_2(Enrich; log2) | H3K4me3_1_ChIP/Input | H3K4me3_1(Enrich; log2) | H3K4me3_2_ChIP/Input | H3K4me3_2(Enrich; log2) | H3K27me3_1_ChIP/Input | H3K27me3_1(Enrich; log2) | H3K27me3_2_ChIP/Input | H3K27me3_2(Enrich; log2) |
|---|
2006834
(v2.0) | Esrrb | 26380
| 269/201 | -0.0919 | 180/201 | -0.2739 | 5/201 | -1.5496 | 23/201 | -1.7528 | 92/201 | 0.9163 | 734/201 | 1.265 |
|
| SPR_Methy_Kobayashi_5KaroundTSS |
| DBTMEE | Gene | Entrez | Total_mC_levels | Number_of_mCs | Averaged_Methylation_level |
|---|
2006834
(v2.0) | Esrrb | 26380
| 109.816 | 118 | 93.06 |
|
| SPR_Methy_Kobayashi_2KaroundTSS |
| DBTMEE | Gene | Entrez | Total_mC_levels | Number_of_mCs | Averaged_Methylation_level |
|---|
2006834
(v2.0) | Esrrb | 26380
| 59.4721 | 66 | 90.11 |
|
| SOLiD_OocyteTo4C_FPKM_gene_guided |
N/A |
| SOLiD_Illumina_Oo_1C_Sperm_FPKM_gene_guided |
N/A |
| SOLiD_Partheno1C_FPKM_gene_guided |
N/A |
| SOLiD_Illumina_Oo_p1C_Sperm_FPKM_gene_guided |
N/A |
| SOLiD_Partheno4C_FPKM_gene_guided |
N/A |
| Illumina_Oo_2C_FPKM_gene_guided |
N/A |
| SOLiD_SC_Oo_REPLICA_FPKM_gene_guided |
N/A |
| NIA60mer |
| DBTMEE | Array_Feature_Number | Oligo_Parent_Clone | Unigene | Gene | Entrez | U_Cluster | NAP_Cluster | Gene_U/NAP | TIGR | SwissProt | EST | Oo | 1C | 2C | 4C | 8C | Morula | Blastocyst |
|---|
0006887
(v1.0) | 2314 | C0310E12-3 | Mm.90048 | Esrrb | 26380
| U014218 | NAP104672-1 | Esrrb; | | Q61539 | U,F,2 | 3.1664 | 2.9961 | 2.7097 | 3.0877 | 3.0134 | 3.2157 | 2.9465 |
0006887
(v1.0) | 5091 | NM_011934.1 | Mm.90048 | Esrrb | 26380
| U014218 | NAP076282-1 | Esrrb; | TC943094 | Q61539 | U,F,2 | 2.3431 | 2.4923 | 2.6311 | 2.4642 | 2.6061 | 2.518 | 2.4277 |
|
| MOE430 |
N/A |
| Agilent44K |
N/A |
| Proteome |
N/A |
