DBTMEE
Database of Transcriptome in Mouse Early Embryos


Gene Search:

DBTMEE:2007031
GeneFam160a1
Synonyms
Descriptionfamily with sequence similarity 160, member A1
LocusNM_172682 UCSC: chr3:85463985-85550131(-) OLP: chr3:85463985-85550131(-)
DB links


Entrez 229488
MGI 2444746
Ensembl ENSMUSG00000051000
Vega OTTMUSG00000026671
Featureprotein-coding
GO_BP
GO_MF
GO_CC
KEGG
Ver2_FPKM
Log10 (FPKM+1)
0.526
SPR
2.379
Oo
2.587
1C
1.552
2C
1.018
4C
0.283
ESC
0.823
MEF
2.63
p1C
1.19
p4C
0.113
iPSC
DBTMEEGeneRefSeqEntrezSPR_FPKMOo_FPKM1C_FPKM2C_FPKM4C_FPKMESC_FPKMMEF_FPKMp1C_FPKMp4C_FPKMiPSC_FPKM
2007031
(v2.0)		Fam160a1NM_172682229488
2.35918238.299385.2734.64449.421780.9201215.65126425.87314.50.297057
SPR_Histone_Erkek_5KaroundTSS
Enrichment of Histone Variant and Modification (+/- 5Kb from TSS)
-0.03
H3.3
Rep.1
-0.01
H3.3
Rep.2
-1.476
H3K4me3
Rep.1
-1.773
H3K4me3
Rep.2
0.564
H3K27me3
Rep.1
0.48
H3K27me3
Rep.2
DBTMEEGeneEntrezH3.3_1_ChIP/InputH3.3_1(Enrich; log2)H3.3_2_ChIP/InputH3.3_2(Enrich; log2)H3K4me3_1_ChIP/InputH3K4me3_1(Enrich; log2)H3K4me3_2_ChIP/InputH3K4me3_2(Enrich; log2)H3K27me3_1_ChIP/InputH3K27me3_1(Enrich; log2)H3K27me3_2_ChIP/InputH3K27me3_2(Enrich; log2)
2007031
(v2.0)		Fam160a1229488
549/393-0.0305423/393-0.0111/393-1.476245/393-1.7727140/3930.5637831/3930.4799
SPR_Histone_Erkek_2KaroundTSS
Enrichment of Histone Variant and Modification (+/- 2Kb from TSS)
-0.22
H3.3
Rep.1
-0.08
H3.3
Rep.2
-1.027
H3K4me3
Rep.1
-1.563
H3K4me3
Rep.2
0.182
H3K27me3
Rep.1
0.228
H3K27me3
Rep.2
DBTMEEGeneEntrezH3.3_1_ChIP/InputH3.3_1(Enrich; log2)H3.3_2_ChIP/InputH3.3_2(Enrich; log2)H3K4me3_1_ChIP/InputH3K4me3_1(Enrich; log2)H3K4me3_2_ChIP/InputH3K4me3_2(Enrich; log2)H3K27me3_1_ChIP/InputH3K27me3_1(Enrich; log2)H3K27me3_2_ChIP/InputH3K27me3_2(Enrich; log2)
2007031
(v2.0)		Fam160a1229488
197/161-0.2202165/161-0.08036/161-1.027321/161-1.562644/1610.1819286/1610.2283
SPR_Methy_Kobayashi_5KaroundTSS
DBTMEEGeneEntrezTotal_mC_levelsNumber_of_mCsAveraged_Methylation_level
2007031
(v2.0)		Fam160a1229488
64.36396894.65
SPR_Methy_Kobayashi_2KaroundTSS
DBTMEEGeneEntrezTotal_mC_levelsNumber_of_mCsAveraged_Methylation_level
2007031
(v2.0)		Fam160a1229488
22.6712590.68
SOLiD_OocyteTo4C_FPKM_gene_guided N/A
SOLiD_Illumina_Oo_1C_Sperm_FPKM_gene_guided N/A
SOLiD_Partheno1C_FPKM_gene_guided N/A
SOLiD_Illumina_Oo_p1C_Sperm_FPKM_gene_guided N/A
SOLiD_Partheno4C_FPKM_gene_guided N/A
Illumina_Oo_2C_FPKM_gene_guided N/A
SOLiD_SC_Oo_REPLICA_FPKM_gene_guided N/A
NIA60mer N/A
MOE430 N/A
Agilent44K N/A
Proteome N/A