DBTMEE
Database of Transcriptome in Mouse Early Embryos


Gene Search:

DBTMEE:2007272
GeneFbxl5
SynonymsFbl4
Fir4
DescriptionF-box and leucine-rich repeat protein 5
LocusNM_001159963 UCSC: chr5:44135857-44173388(-) OLP: chr5:44135857-44173388(-)
NM_178729 UCSC: chr5:44148988-44173388(-) OLP: chr5:44148988-44173388(-)
DB links


Entrez 242960
MGI 2152883
Ensembl ENSMUSG00000039753
Vega OTTMUSG00000029016
Featureprotein-coding
GO_BP
  •   3 Terms
      protein ubiquitination (GO:0016567)
      SCF-dependent proteasomal ubiquitin-dependent protein catabolic process (GO:0031146)
      iron ion homeostasis (GO:0055072)
GO_MF
GO_CC
KEGG
Ver2_FPKM
Log10 (FPKM+1)
1.141
SPR
1.615
Oo
1.983
1C
1.673
2C
1.576
4C
1.552
ESC
1.545
MEF
1.829
p1C
1.432
p4C
1.521
iPSC
DBTMEEGeneRefSeqEntrezSPR_FPKMOo_FPKM1C_FPKM2C_FPKM4C_FPKMESC_FPKMMEF_FPKMp1C_FPKMp4C_FPKMiPSC_FPKM
2007272
(v2.0)		Fbxl5NM_001159963,NM_178729242960
12.822640.17195.097446.109636.711434.633634.058566.473226.042632.1942
SPR_Histone_Erkek_5KaroundTSS
Enrichment of Histone Variant and Modification (+/- 5Kb from TSS)
0.189
H3.3
Rep.1
0.046
H3.3
Rep.2
1.964
H3K4me3
Rep.1
0.6
H3K4me3
Rep.2
-0.965
H3K27me3
Rep.1
-0.543
H3K27me3
Rep.2
DBTMEEGeneEntrezH3.3_1_ChIP/InputH3.3_1(Enrich; log2)H3.3_2_ChIP/InputH3.3_2(Enrich; log2)H3K4me3_1_ChIP/InputH3K4me3_1(Enrich; log2)H3K4me3_2_ChIP/InputH3K4me3_2(Enrich; log2)H3K27me3_1_ChIP/InputH3K27me3_1(Enrich; log2)H3K27me3_2_ChIP/InputH3K27me3_2(Enrich; log2)
2007272
(v2.0)		Fbxl5242960
628/3860.1889432/3860.0461127/3861.964233/3860.599847/386-0.9652401/386-0.5426
SPR_Histone_Erkek_2KaroundTSS
Enrichment of Histone Variant and Modification (+/- 2Kb from TSS)
0.707
H3.3
Rep.1
0.491
H3.3
Rep.2
3.371
H3K4me3
Rep.1
2.032
H3K4me3
Rep.2
-0.933
H3K27me3
Rep.1
-1.16
H3K27me3
Rep.2
DBTMEEGeneEntrezH3.3_1_ChIP/InputH3.3_1(Enrich; log2)H3.3_2_ChIP/InputH3.3_2(Enrich; log2)H3K4me3_1_ChIP/InputH3K4me3_1(Enrich; log2)H3K4me3_2_ChIP/InputH3K4me3_2(Enrich; log2)H3K27me3_1_ChIP/InputH3K27me3_1(Enrich; log2)H3K27me3_2_ChIP/InputH3K27me3_2(Enrich; log2)
2007272
(v2.0)		Fbxl5242960
306/1310.7069200/1310.4911121/1313.3706216/1312.03216/131-0.933388/131-1.1597
SPR_Methy_Kobayashi_5KaroundTSS
DBTMEEGeneEntrezTotal_mC_levelsNumber_of_mCsAveraged_Methylation_level
2007272
(v2.0)		Fbxl5242960
54.816111746.85
SPR_Methy_Kobayashi_2KaroundTSS
DBTMEEGeneEntrezTotal_mC_levelsNumber_of_mCsAveraged_Methylation_level
2007272
(v2.0)		Fbxl5242960
14.19267419.18
SOLiD_OocyteTo4C_FPKM_gene_guided N/A
SOLiD_Illumina_Oo_1C_Sperm_FPKM_gene_guided N/A
SOLiD_Partheno1C_FPKM_gene_guided N/A
SOLiD_Illumina_Oo_p1C_Sperm_FPKM_gene_guided N/A
SOLiD_Partheno4C_FPKM_gene_guided N/A
Illumina_Oo_2C_FPKM_gene_guided N/A
SOLiD_SC_Oo_REPLICA_FPKM_gene_guided N/A
NIA60mer N/A
MOE430 N/A
Agilent44K N/A
Proteome N/A