DBTMEE
Database of Transcriptome in Mouse Early Embryos


Gene Search:

DBTMEE:2007933
GeneGgnbp2
SynonymsDIF-3
Zfp403
Descriptiongametogenetin binding protein 2
LocusNM_153144 UCSC: chr11:84645863-84684240(-) OLP: chr11:84645863-84684240(-)
DB links


Entrez 217039
MGI 2387356
Ensembl ENSMUSG00000020530
Vega OTTMUSG00000001025
Featureprotein-coding
GO_BP
GO_MF
GO_CC
KEGG
Ver2_FPKM
Log10 (FPKM+1)
1.449
SPR
0.665
Oo
0.731
1C
1.153
2C
1.14
4C
1.352
ESC
1.504
MEF
0.542
p1C
1.169
p4C
1.329
iPSC
DBTMEEGeneRefSeqEntrezSPR_FPKMOo_FPKM1C_FPKM2C_FPKM4C_FPKMESC_FPKMMEF_FPKMp1C_FPKMp4C_FPKMiPSC_FPKM
2007933
(v2.0)		Ggnbp2NM_153144217039
27.11823.624274.3814813.211412.795321.495930.89872.4842613.752320.3328
SPR_Histone_Erkek_5KaroundTSS
Enrichment of Histone Variant and Modification (+/- 5Kb from TSS)
0.733
H3.3
Rep.1
0.698
H3.3
Rep.2
4.706
H3K4me3
Rep.1
3.891
H3K4me3
Rep.2
-2.407
H3K27me3
Rep.1
-2.473
H3K27me3
Rep.2
DBTMEEGeneEntrezH3.3_1_ChIP/InputH3.3_1(Enrich; log2)H3.3_2_ChIP/InputH3.3_2(Enrich; log2)H3K4me3_1_ChIP/InputH3K4me3_1(Enrich; log2)H3K4me3_2_ChIP/InputH3K4me3_2(Enrich; log2)H3K27me3_1_ChIP/InputH3K27me3_1(Enrich; log2)H3K27me3_2_ChIP/InputH3K27me3_2(Enrich; log2)
2007933
(v2.0)		Ggnbp2217039
724/3050.7325537/3050.6981681/3054.70571812/3053.890913/305-2.407182/305-2.4728
SPR_Histone_Erkek_2KaroundTSS
Enrichment of Histone Variant and Modification (+/- 2Kb from TSS)
1.027
H3.3
Rep.1
0.839
H3.3
Rep.2
5.647
H3K4me3
Rep.1
4.723
H3K4me3
Rep.2
-2.003
H3K27me3
Rep.1
-1.88
H3K27me3
Rep.2
DBTMEEGeneEntrezH3.3_1_ChIP/InputH3.3_1(Enrich; log2)H3.3_2_ChIP/InputH3.3_2(Enrich; log2)H3K4me3_1_ChIP/InputH3K4me3_1(Enrich; log2)H3K4me3_2_ChIP/InputH3K4me3_2(Enrich; log2)H3K27me3_1_ChIP/InputH3K27me3_1(Enrich; log2)H3K27me3_2_ChIP/InputH3K27me3_2(Enrich; log2)
2007933
(v2.0)		Ggnbp2217039
426/1461.027284/1460.8394652/1465.6471558/1464.72328/146-2.002759/146-1.8798
SPR_Methy_Kobayashi_5KaroundTSS
DBTMEEGeneEntrezTotal_mC_levelsNumber_of_mCsAveraged_Methylation_level
2007933
(v2.0)		Ggnbp2217039
31.526511427.65
SPR_Methy_Kobayashi_2KaroundTSS
DBTMEEGeneEntrezTotal_mC_levelsNumber_of_mCsAveraged_Methylation_level
2007933
(v2.0)		Ggnbp2217039
7.037878.09
SOLiD_OocyteTo4C_FPKM_gene_guided N/A
SOLiD_Illumina_Oo_1C_Sperm_FPKM_gene_guided N/A
SOLiD_Partheno1C_FPKM_gene_guided N/A
SOLiD_Illumina_Oo_p1C_Sperm_FPKM_gene_guided N/A
SOLiD_Partheno4C_FPKM_gene_guided N/A
Illumina_Oo_2C_FPKM_gene_guided N/A
SOLiD_SC_Oo_REPLICA_FPKM_gene_guided N/A
NIA60mer N/A
MOE430 N/A
Agilent44K N/A
Proteome N/A