DBTMEE

DBTMEE
Database of Transcriptome in Mouse Early Embryos

DBTMEE:2008001

Gene

Glb1

Synonyms

Bge
Bgl
Bgl-e
Bgl-s
Bgl-t
Bgs
Bgt

Description

galactosidase, beta 1

Locus

NM_009752 UCSC: chr9:114310196-114383497(+) OLP: chr9:114310196-114383497(+)
NR_108102 UCSC: chr9:114310196-114383497(+) OLP: chr9:114310196-114383497(+)
NR_108101 UCSC: chr9:114310196-114383497(+) OLP: chr9:114310196-114383497(+)

DB links

Entrez 12091
MGI 88151
Ensembl ENSMUSG00000045594

Feature

protein-coding

GO_BP

3 Terms

GO_MF

5 Terms

GO_CC

4 Terms

KEGG

7 Terms

DBTMEE	Gene	RefSeq	Entrez	SPR_FPKM	Oo_FPKM	1C_FPKM	2C_FPKM	4C_FPKM	ESC_FPKM	MEF_FPKM	p1C_FPKM	p4C_FPKM	iPSC_FPKM
2008001 (v2.0)	Glb1	NM_001200002,NM_009752,NR_108101,NR_108102	12091	54.7442	4.97972	6.78469	122.263	210.123	24.4336	16.7279	7.40357	208.313	21.5232

SPR_Histone_Erkek_5KaroundTSS

DBTMEE	Gene	Entrez	H3.3_1_ChIP/Input	H3.3_1(Enrich; log2)	H3.3_2_ChIP/Input	H3.3_2(Enrich; log2)	H3K4me3_1_ChIP/Input	H3K4me3_1(Enrich; log2)	H3K4me3_2_ChIP/Input	H3K4me3_2(Enrich; log2)	H3K27me3_1_ChIP/Input	H3K27me3_1(Enrich; log2)	H3K27me3_2_ChIP/Input	H3K27me3_2(Enrich; log2)
2008001 (v2.0)	Glb1	12091	820/446	0.365	480/446	-0.0102	136/446	1.8595	514/446	1.5307	245/446	1.186	1216/446	0.8462

SPR_Histone_Erkek_2KaroundTSS

DBTMEE	Gene	Entrez	H3.3_1_ChIP/Input	H3.3_1(Enrich; log2)	H3.3_2_ChIP/Input	H3.3_2(Enrich; log2)	H3K4me3_1_ChIP/Input	H3K4me3_1(Enrich; log2)	H3K4me3_2_ChIP/Input	H3K4me3_2(Enrich; log2)	H3K27me3_1_ChIP/Input	H3K27me3_1(Enrich; log2)	H3K27me3_2_ChIP/Input	H3K27me3_2(Enrich; log2)
2008001 (v2.0)	Glb1	12091	389/154	0.82	234/154	0.4847	126/154	3.2135	476/154	2.939	185/154	2.2917	820/154	1.8067

SPR_Methy_Kobayashi_5KaroundTSS

DBTMEE	Gene	Entrez	Total_mC_levels	Number_of_mCs	Averaged_Methylation_level
2008001 (v2.0)	Glb1	12091	108.686	185	58.75

SPR_Methy_Kobayashi_2KaroundTSS

DBTMEE	Gene	Entrez	Total_mC_levels	Number_of_mCs	Averaged_Methylation_level
2008001 (v2.0)	Glb1	12091	12.2773	82	14.97

SOLiD_OocyteTo4C_FPKM_gene_guided

N/A

SOLiD_Illumina_Oo_1C_Sperm_FPKM_gene_guided

N/A

SOLiD_Partheno1C_FPKM_gene_guided

N/A

SOLiD_Illumina_Oo_p1C_Sperm_FPKM_gene_guided

N/A

SOLiD_Partheno4C_FPKM_gene_guided

N/A

Illumina_Oo_2C_FPKM_gene_guided

N/A

SOLiD_SC_Oo_REPLICA_FPKM_gene_guided

N/A

DBTMEE	Array_Feature_Number	Oligo_Parent_Clone	Unigene	Gene	Entrez	U_Cluster	NAP_Cluster	Gene_U/NAP	TIGR	SwissProt	EST	Oo	1C	2C	4C	8C	Morula	Blastocyst
0008067 (v1.0)	9854	H3087C07-3		Glb1	12091	U011100	NAP012785-001	Glb1;	TC935377,TC935373,TC935372	P23780	U,F,2	3.1065	3.2017	3.4632	3.8443	3.3076	3.5142	3.7339

N/A

N/A

N/A