DBTMEE
Database of Transcriptome in Mouse Early Embryos


Gene Search:

DBTMEE:2009537
GeneGrsf1
SynonymsD5Wsu31e
DescriptionG-rich RNA sequence binding factor 1
LocusNM_001098476 UCSC: chr5:89088258-89104605(-) OLP: chr5:89088258-89104605(-)
NM_178700 UCSC: chr5:89088258-89105196(-) OLP: chr5:89088258-89105196(-)
DB links


Entrez 231413
MGI 106479
Ensembl ENSMUSG00000044221
Vega OTTMUSG00000025237
Featureprotein-coding
GO_BP
GO_MF
GO_CC
KEGG
Ver2_FPKM
Log10 (FPKM+1)
1.43
SPR
1.679
Oo
1.893
1C
2.306
2C
2.196
4C
1.558
ESC
1.559
MEF
1.768
p1C
2.067
p4C
1.593
iPSC
DBTMEEGeneRefSeqEntrezSPR_FPKMOo_FPKM1C_FPKM2C_FPKM4C_FPKMESC_FPKMMEF_FPKMp1C_FPKMp4C_FPKMiPSC_FPKM
2009537
(v2.0)		Grsf1NM_001098476,NM_178700231413
25.926746.781177.1533201.375155.9635.163135.195157.5812115.63938.2112
SPR_Histone_Erkek_5KaroundTSS
Enrichment of Histone Variant and Modification (+/- 5Kb from TSS)
0.357
H3.3
Rep.1
0.276
H3.3
Rep.2
1.809
H3K4me3
Rep.1
0.611
H3K4me3
Rep.2
-0.598
H3K27me3
Rep.1
-0.282
H3K27me3
Rep.2
DBTMEEGeneEntrezH3.3_1_ChIP/InputH3.3_1(Enrich; log2)H3.3_2_ChIP/InputH3.3_2(Enrich; log2)H3K4me3_1_ChIP/InputH3K4me3_1(Enrich; log2)H3K4me3_2_ChIP/InputH3K4me3_2(Enrich; log2)H3K27me3_1_ChIP/InputH3K27me3_1(Enrich; log2)H3K27me3_2_ChIP/InputH3K27me3_2(Enrich; log2)
2009537
(v2.0)		Grsf1231413
649/3550.3567466/3550.2756105/3551.8088216/3550.61156/355-0.5978442/355-0.2822
SPR_Histone_Erkek_2KaroundTSS
Enrichment of Histone Variant and Modification (+/- 2Kb from TSS)
0.933
H3.3
Rep.1
0.73
H3.3
Rep.2
3.102
H3K4me3
Rep.1
1.903
H3K4me3
Rep.2
-1.572
H3K27me3
Rep.1
-0.683
H3K27me3
Rep.2
DBTMEEGeneEntrezH3.3_1_ChIP/InputH3.3_1(Enrich; log2)H3.3_2_ChIP/InputH3.3_2(Enrich; log2)H3K4me3_1_ChIP/InputH3K4me3_1(Enrich; log2)H3K4me3_2_ChIP/InputH3K4me3_2(Enrich; log2)H3K27me3_1_ChIP/InputH3K27me3_1(Enrich; log2)H3K27me3_2_ChIP/InputH3K27me3_2(Enrich; log2)
2009537
(v2.0)		Grsf1231413
361/1320.9334238/1320.7299101/1323.1022199/1321.903510/132-1.572124/132-0.6829
SPR_Methy_Kobayashi_5KaroundTSS
DBTMEEGeneEntrezTotal_mC_levelsNumber_of_mCsAveraged_Methylation_level
2009537
(v2.0)		Grsf1231413
91.328416555.35
SPR_Methy_Kobayashi_2KaroundTSS
DBTMEEGeneEntrezTotal_mC_levelsNumber_of_mCsAveraged_Methylation_level
2009537
(v2.0)		Grsf1231413
20.24298823
SOLiD_OocyteTo4C_FPKM_gene_guided N/A
SOLiD_Illumina_Oo_1C_Sperm_FPKM_gene_guided N/A
SOLiD_Partheno1C_FPKM_gene_guided N/A
SOLiD_Illumina_Oo_p1C_Sperm_FPKM_gene_guided N/A
SOLiD_Partheno4C_FPKM_gene_guided N/A
Illumina_Oo_2C_FPKM_gene_guided N/A
SOLiD_SC_Oo_REPLICA_FPKM_gene_guided N/A
NIA60mer N/A
MOE430 N/A
Agilent44K N/A
Proteome N/A