DBTMEE
Database of Transcriptome in Mouse Early Embryos


Gene Search:

DBTMEE:2009561
GeneGsk3b
SynonymsGSK-3
GSK-3beta
GSK3
Descriptionglycogen synthase kinase 3 beta
LocusNM_019827 UCSC: chr16:38089087-38246165(+) OLP: chr16:38089087-38246165(+)
DB links


Entrez 56637
MGI 1861437
Ensembl ENSMUSG00000022812
Vega OTTMUSG00000016276
Featureprotein-coding
GO_BP
  •   60 Terms
      re-entry into mitotic cell cycle (GO:0000320)
      epithelial to mesenchymal transition (GO:0001837)
      positive regulation of cell-matrix adhesion (GO:0001954)
      carbohydrate metabolic process (GO:0005975)
      glycogen metabolic process (GO:0005977)
      regulation of gene expression by genetic imprinting (GO:0006349)
      protein phosphorylation (GO:0006468)
      protein export from nucleus (GO:0006611)
      ER overload response (GO:0006983)
      cytoskeleton organization (GO:0007010)
      establishment or maintenance of cell polarity (GO:0007163)
      multicellular organismal development (GO:0007275)
      nervous system development (GO:0007399)
      axonogenesis (GO:0007409)
      myoblast fusion (GO:0007520)
      circadian rhythm (GO:0007623)
      cell proliferation (GO:0008283)
      organ morphogenesis (GO:0009887)
      negative regulation of signal transduction (GO:0009968)
      negative regulation of cardiac muscle hypertrophy (GO:0010614)
      positive regulation of peptidyl-threonine phosphorylation (GO:0010800)
      negative regulation of neuron projection development (GO:0010977)
      negative regulation of neuron maturation (GO:0014043)
      myotube differentiation (GO:0014902)
      Wnt signaling pathway (GO:0016055)
      phosphorylation (GO:0016310)
      cell migration (GO:0016477)
      peptidyl-serine phosphorylation (GO:0018105)
      hippocampus development (GO:0021766)
      establishment of cell polarity (GO:0030010)
      cell differentiation (GO:0030154)
      negative regulation of protein complex assembly (GO:0031333)
      positive regulation of protein complex assembly (GO:0031334)
      negative regulation of protein binding (GO:0032091)
      positive regulation of protein binding (GO:0032092)
      positive regulation of proteasomal ubiquitin-dependent protein catabolic process (GO:0032436)
      positive regulation of Rac GTPase activity (GO:0032855)
      regulation of microtubule-based process (GO:0032886)
      positive regulation of peptidyl-serine phosphorylation (GO:0033138)
      protein localization to microtubule (GO:0035372)
      intracellular signal transduction (GO:0035556)
      cellular response to interleukin-3 (GO:0036016)
      positive regulation of apoptotic process (GO:0043065)
      negative regulation of apoptotic process (GO:0043066)
      negative regulation of MAP kinase activity (GO:0043407)
      hypermethylation of CpG island (GO:0044027)
      canonical Wnt signaling pathway involved in positive regulation of apoptotic process (GO:0044337)
      fat cell differentiation (GO:0045444)
      positive regulation of transcription from RNA polymerase II promoter (GO:0045944)
      positive regulation of protein export from nucleus (GO:0046827)
      regulation of neuronal synaptic plasticity (GO:0048168)
      rhythmic process (GO:0048511)
      negative regulation of dendrite morphogenesis (GO:0050774)
      negative regulation of NFAT protein import into nucleus (GO:0051534)
      canonical Wnt signaling pathway (GO:0060070)
      superior temporal gyrus development (GO:0071109)
      cellular response to mechanical stimulus (GO:0071260)
      extrinsic apoptotic signaling pathway in absence of ligand (GO:0097192)
      positive regulation of mitochondrial outer membrane permeabilization involved in apoptotic signaling pathway (GO:1901030)
      positive regulation of stem cell differentiation (GO:2000738)
GO_MF
GO_CC
KEGG
Ver2_FPKM
DBTMEEGeneRefSeqEntrezSPR_FPKMOo_FPKM1C_FPKM2C_FPKM4C_FPKMESC_FPKMMEF_FPKMp1C_FPKMp4C_FPKMiPSC_FPKM
2009561
(v2.0)		Gsk3bNM_01982756637
13.92213.209285.5457513.03415.30125.8018510.35836.5420911.14933.68237
SPR_Histone_Erkek_5KaroundTSS
DBTMEEGeneEntrezH3.3_1_ChIP/InputH3.3_1(Enrich; log2)H3.3_2_ChIP/InputH3.3_2(Enrich; log2)H3K4me3_1_ChIP/InputH3K4me3_1(Enrich; log2)H3K4me3_2_ChIP/InputH3K4me3_2(Enrich; log2)H3K27me3_1_ChIP/InputH3K27me3_1(Enrich; log2)H3K27me3_2_ChIP/InputH3K27me3_2(Enrich; log2)
2009561
(v2.0)		Gsk3b56637
696/3760.3747457/3760.1648222/3762.8016607/3762.01537/376-1.2648280/376-1.0207
SPR_Histone_Erkek_2KaroundTSS
DBTMEEGeneEntrezH3.3_1_ChIP/InputH3.3_1(Enrich; log2)H3.3_2_ChIP/InputH3.3_2(Enrich; log2)H3K4me3_1_ChIP/InputH3K4me3_1(Enrich; log2)H3K4me3_2_ChIP/InputH3K4me3_2(Enrich; log2)H3K27me3_1_ChIP/InputH3K27me3_1(Enrich; log2)H3K27me3_2_ChIP/InputH3K27me3_2(Enrich; log2)
2009561
(v2.0)		Gsk3b56637
418/1580.8866195/1580.1862207/1583.891493/1582.95318/158-2.113696/158-1.3047
SPR_Methy_Kobayashi_5KaroundTSS
DBTMEEGeneEntrezTotal_mC_levelsNumber_of_mCsAveraged_Methylation_level
2009561
(v2.0)		Gsk3b56637
41.998518223.08
SPR_Methy_Kobayashi_2KaroundTSS
DBTMEEGeneEntrezTotal_mC_levelsNumber_of_mCsAveraged_Methylation_level
2009561
(v2.0)		Gsk3b56637
5.02161353.72
SOLiD_OocyteTo4C_FPKM_gene_guided N/A
SOLiD_Illumina_Oo_1C_Sperm_FPKM_gene_guided N/A
SOLiD_Partheno1C_FPKM_gene_guided N/A
SOLiD_Illumina_Oo_p1C_Sperm_FPKM_gene_guided N/A
SOLiD_Partheno4C_FPKM_gene_guided N/A
Illumina_Oo_2C_FPKM_gene_guided N/A
SOLiD_SC_Oo_REPLICA_FPKM_gene_guided N/A
NIA60mer
DBTMEEArray_Feature_NumberOligo_Parent_CloneUnigeneGeneEntrezU_ClusterNAP_ClusterGene_U/NAPTIGRSwissProtESTOo1C2C4C8CMorulaBlastocyst
0009681
(v1.0)		5457NM_019827.1Mm.34370Gsk3b56637
U017093NAP120866-001Gsk3b;TC927526,TC863955Q9WV60U,F,22.69822.8213.11283.09392.94452.89812.9226
MOE430 N/A
Agilent44K N/A
Proteome N/A