DBTMEE
Database of Transcriptome in Mouse Early Embryos


Gene Search:

DBTMEE:2009658
GeneGzf1
SynonymsZfp336
DescriptionGDNF-inducible zinc finger protein 1
LocusNM_028986 UCSC: chr2:148506856-148518685(+) OLP: chr2:148506856-148518685(+)
DB links


Entrez 74533
MGI 1921783
Ensembl ENSMUSG00000027439
Vega OTTMUSG00000015714
Featureprotein-coding
GO_BP
  •   5 Terms
      negative regulation of transcription from RNA polymerase II promoter (GO:0000122)
      branching involved in ureteric bud morphogenesis (GO:0001658)
      transcription, DNA-templated (GO:0006351)
      regulation of transcription, DNA-templated (GO:0006355)
      negative regulation of transcription, DNA-templated (GO:0045892)
GO_MF
  •   7 Terms
      RNA polymerase II core promoter proximal region sequence-specific DNA binding (GO:0000978)
      RNA polymerase II distal enhancer sequence-specific DNA binding (GO:0000980)
      RNA polymerase II core promoter proximal region sequence-specific DNA binding transcription factor activity involved in negative regulation of transcription (GO:0001078)
      nucleic acid binding (GO:0003676)
      DNA binding (GO:0003677)
      sequence-specific DNA binding (GO:0043565)
      metal ion binding (GO:0046872)
GO_CC
KEGG
Ver2_FPKM
DBTMEEGeneRefSeqEntrezSPR_FPKMOo_FPKM1C_FPKM2C_FPKM4C_FPKMESC_FPKMMEF_FPKMp1C_FPKMp4C_FPKMiPSC_FPKM
2009658
(v2.0)		Gzf1NM_02898674533
8.7503134.38856.206417.80926.4560110.045814.29756.51559.9397612.0176
SPR_Histone_Erkek_5KaroundTSS
DBTMEEGeneEntrezH3.3_1_ChIP/InputH3.3_1(Enrich; log2)H3.3_2_ChIP/InputH3.3_2(Enrich; log2)H3K4me3_1_ChIP/InputH3K4me3_1(Enrich; log2)H3K4me3_2_ChIP/InputH3K4me3_2(Enrich; log2)H3K27me3_1_ChIP/InputH3K27me3_1(Enrich; log2)H3K27me3_2_ChIP/InputH3K27me3_2(Enrich; log2)
2009658
(v2.0)		Gzf174533
847/5170.199546/517-0.0374511/5173.55361792/5173.118421/517-2.5084166/517-2.228
SPR_Histone_Erkek_2KaroundTSS
DBTMEEGeneEntrezH3.3_1_ChIP/InputH3.3_1(Enrich; log2)H3.3_2_ChIP/InputH3.3_2(Enrich; log2)H3K4me3_1_ChIP/InputH3K4me3_1(Enrich; log2)H3K4me3_2_ChIP/InputH3K4me3_2(Enrich; log2)H3K27me3_1_ChIP/InputH3K27me3_1(Enrich; log2)H3K27me3_2_ChIP/InputH3K27me3_2(Enrich; log2)
2009658
(v2.0)		Gzf174533
317/2040.1225201/204-0.1369301/2044.0837915/2043.48047/204-2.643880/204-1.9298
SPR_Methy_Kobayashi_5KaroundTSS
DBTMEEGeneEntrezTotal_mC_levelsNumber_of_mCsAveraged_Methylation_level
2009658
(v2.0)		Gzf174533
50.322814534.71
SPR_Methy_Kobayashi_2KaroundTSS
DBTMEEGeneEntrezTotal_mC_levelsNumber_of_mCsAveraged_Methylation_level
2009658
(v2.0)		Gzf174533
9.99057213.88
SOLiD_OocyteTo4C_FPKM_gene_guided N/A
SOLiD_Illumina_Oo_1C_Sperm_FPKM_gene_guided N/A
SOLiD_Partheno1C_FPKM_gene_guided N/A
SOLiD_Illumina_Oo_p1C_Sperm_FPKM_gene_guided N/A
SOLiD_Partheno4C_FPKM_gene_guided N/A
Illumina_Oo_2C_FPKM_gene_guided N/A
SOLiD_SC_Oo_REPLICA_FPKM_gene_guided N/A
NIA60mer N/A
MOE430 N/A
Agilent44K N/A
Proteome N/A