DBTMEE
Database of Transcriptome in Mouse Early Embryos


Gene Search:

DBTMEE:2009903
GeneHic2
SynonymsHRG22
Descriptionhypermethylated in cancer 2
LocusNM_178922 UCSC: chr16:17233680-17263523(+) OLP: chr16:17233680-17263523(+)
DB links


Entrez 58180
MGI 1929869
Ensembl ENSMUSG00000050240
Vega OTTMUSG00000038081
Featureprotein-coding
GO_BP
  •   2 Terms
GO_MF
GO_CC
KEGG
Ver2_FPKM
Log10 (FPKM+1)
0.242
SPR
0.947
Oo
1.28
1C
1.664
2C
1.298
4C
1.208
ESC
0.272
MEF
1.413
p1C
1.329
p4C
1.148
iPSC
DBTMEEGeneRefSeqEntrezSPR_FPKMOo_FPKM1C_FPKM2C_FPKM4C_FPKMESC_FPKMMEF_FPKMp1C_FPKMp4C_FPKMiPSC_FPKM
2009903
(v2.0)		Hic2NM_17892258180
0.7476657.8459618.063145.106218.877915.13940.86894624.887120.329113.0626
SPR_Histone_Erkek_5KaroundTSS
Enrichment of Histone Variant and Modification (+/- 5Kb from TSS)
0.007
H3.3
Rep.1
-0.137
H3.3
Rep.2
2.592
H3K4me3
Rep.1
1.814
H3K4me3
Rep.2
0.59
H3K27me3
Rep.1
0.608
H3K27me3
Rep.2
DBTMEEGeneEntrezH3.3_1_ChIP/InputH3.3_1(Enrich; log2)H3.3_2_ChIP/InputH3.3_2(Enrich; log2)H3K4me3_1_ChIP/InputH3K4me3_1(Enrich; log2)H3K4me3_2_ChIP/InputH3K4me3_2(Enrich; log2)H3K27me3_1_ChIP/InputH3K27me3_1(Enrich; log2)H3K27me3_2_ChIP/InputH3K27me3_2(Enrich; log2)
2009903
(v2.0)		Hic258180
684/4770.0072470/477-0.1372242/4772.5918669/4771.8139173/4770.59031102/4770.6077
SPR_Histone_Erkek_2KaroundTSS
Enrichment of Histone Variant and Modification (+/- 2Kb from TSS)
0.415
H3.3
Rep.1
0.169
H3.3
Rep.2
3.894
H3K4me3
Rep.1
2.98
H3K4me3
Rep.2
-0.059
H3K27me3
Rep.1
0.246
H3K27me3
Rep.2
DBTMEEGeneEntrezH3.3_1_ChIP/InputH3.3_1(Enrich; log2)H3.3_2_ChIP/InputH3.3_2(Enrich; log2)H3K4me3_1_ChIP/InputH3K4me3_1(Enrich; log2)H3K4me3_2_ChIP/InputH3K4me3_2(Enrich; log2)H3K27me3_1_ChIP/InputH3K27me3_1(Enrich; log2)H3K27me3_2_ChIP/InputH3K27me3_2(Enrich; log2)
2009903
(v2.0)		Hic258180
339/1780.4146217/1780.1687232/1783.8944565/1782.9841/178-0.059320/1780.2456
SPR_Methy_Kobayashi_5KaroundTSS
DBTMEEGeneEntrezTotal_mC_levelsNumber_of_mCsAveraged_Methylation_level
2009903
(v2.0)		Hic258180
60.282114342.16
SPR_Methy_Kobayashi_2KaroundTSS
DBTMEEGeneEntrezTotal_mC_levelsNumber_of_mCsAveraged_Methylation_level
2009903
(v2.0)		Hic258180
17.96289718.52
SOLiD_OocyteTo4C_FPKM_gene_guided N/A
SOLiD_Illumina_Oo_1C_Sperm_FPKM_gene_guided N/A
SOLiD_Partheno1C_FPKM_gene_guided N/A
SOLiD_Illumina_Oo_p1C_Sperm_FPKM_gene_guided N/A
SOLiD_Partheno4C_FPKM_gene_guided N/A
Illumina_Oo_2C_FPKM_gene_guided N/A
SOLiD_SC_Oo_REPLICA_FPKM_gene_guided N/A
NIA60mer N/A
MOE430 N/A
Agilent44K N/A
Proteome N/A