DBTMEE
Database of Transcriptome in Mouse Early Embryos


Gene Search:

DBTMEE:2009974
GeneHist1h4h
Synonyms
Descriptionhistone cluster 1, H4h
LocusNM_153173 UCSC: chr13:23622913-23623347(+) OLP: chr13:23622913-23623347(+)
DB links


Entrez 69386
MGI 2448427
Ensembl ENSMUSG00000060981
Vega OTTMUSG00000000568
Featureprotein-coding
GO_BP
  •   3 Terms
      DNA replication-dependent nucleosome assembly (GO:0006335)
      DNA replication-independent nucleosome assembly (GO:0006336)
      negative regulation of megakaryocyte differentiation (GO:0045653)
GO_MF
GO_CC
KEGG
  •   1 Terms
      Systemic lupus erythematosus (mmu05322)
Ver2_FPKM
Log10 (FPKM+1)
0.553
SPR
1.306
Oo
1.838
1C
1.058
2C
1.344
4C
0.575
ESC
1.821
MEF
2.128
p1C
1.486
p4C
0.721
iPSC
DBTMEEGeneRefSeqEntrezSPR_FPKMOo_FPKM1C_FPKM2C_FPKM4C_FPKMESC_FPKMMEF_FPKMp1C_FPKMp4C_FPKMiPSC_FPKM
2009974
(v2.0)		Hist1h4hNM_15317369386
2.574819.21667.903510.437821.06642.7585865.2868133.31829.64074.25489
SPR_Histone_Erkek_5KaroundTSS
Enrichment of Histone Variant and Modification (+/- 5Kb from TSS)
-0.101
H3.3
Rep.1
-0.242
H3.3
Rep.2
1.99
H3K4me3
Rep.1
1.929
H3K4me3
Rep.2
-0.798
H3K27me3
Rep.1
-1.013
H3K27me3
Rep.2
DBTMEEGeneEntrezH3.3_1_ChIP/InputH3.3_1(Enrich; log2)H3.3_2_ChIP/InputH3.3_2(Enrich; log2)H3K4me3_1_ChIP/InputH3K4me3_1(Enrich; log2)H3K4me3_2_ChIP/InputH3K4me3_2(Enrich; log2)H3K27me3_1_ChIP/InputH3K27me3_1(Enrich; log2)H3K27me3_2_ChIP/InputH3K27me3_2(Enrich; log2)
2009974
(v2.0)		Hist1h4h69386
524/394-0.1012361/394-0.2417132/3941.9905599/3941.928954/394-0.7981295/394-1.0131
SPR_Histone_Erkek_2KaroundTSS
Enrichment of Histone Variant and Modification (+/- 2Kb from TSS)
0.04
H3.3
Rep.1
-0.16
H3.3
Rep.2
2.322
H3K4me3
Rep.1
2.455
H3K4me3
Rep.2
-2.345
H3K27me3
Rep.1
-2.031
H3K27me3
Rep.2
DBTMEEGeneEntrezH3.3_1_ChIP/InputH3.3_1(Enrich; log2)H3.3_2_ChIP/InputH3.3_2(Enrich; log2)H3K4me3_1_ChIP/InputH3K4me3_1(Enrich; log2)H3K4me3_2_ChIP/InputH3K4me3_2(Enrich; log2)H3K27me3_1_ChIP/InputH3K27me3_1(Enrich; log2)H3K27me3_2_ChIP/InputH3K27me3_2(Enrich; log2)
2009974
(v2.0)		Hist1h4h69386
242/1650.0395160/165-0.159672/1652.3222364/1652.45497/165-2.344560/165-2.0315
SPR_Methy_Kobayashi_5KaroundTSS
DBTMEEGeneEntrezTotal_mC_levelsNumber_of_mCsAveraged_Methylation_level
2009974
(v2.0)		Hist1h4h69386
25.17618813.39
SPR_Methy_Kobayashi_2KaroundTSS
DBTMEEGeneEntrezTotal_mC_levelsNumber_of_mCsAveraged_Methylation_level
2009974
(v2.0)		Hist1h4h69386
7.2483828.84
SOLiD_OocyteTo4C_FPKM_gene_guided N/A
SOLiD_Illumina_Oo_1C_Sperm_FPKM_gene_guided N/A
SOLiD_Partheno1C_FPKM_gene_guided N/A
SOLiD_Illumina_Oo_p1C_Sperm_FPKM_gene_guided N/A
SOLiD_Partheno4C_FPKM_gene_guided N/A
Illumina_Oo_2C_FPKM_gene_guided N/A
SOLiD_SC_Oo_REPLICA_FPKM_gene_guided N/A
NIA60mer N/A
MOE430 N/A
Agilent44K N/A
Proteome N/A