DBTMEE
Database of Transcriptome in Mouse Early Embryos


Gene Search:

DBTMEE:2010690
GeneItch
SynonymsAIP4
Descriptionitchy, E3 ubiquitin protein ligase
LocusNM_008395 UCSC: chr2:154959217-155052591(+) OLP: chr2:154959217-155052591(+)
NM_001243712 UCSC: chr2:154959217-155052591(+) OLP: chr2:154959217-155052591(+)
DB links


Entrez 16396
MGI 1202301
Ensembl ENSMUSG00000027598
Vega OTTMUSG00000016008
Featureprotein-coding
GO_BP
  •   19 Terms
      protein polyubiquitination (GO:0000209)
      immune system process (GO:0002376)
      positive regulation of T cell anergy (GO:0002669)
      ubiquitin-dependent protein catabolic process (GO:0006511)
      apoptotic process (GO:0006915)
      protein ubiquitination (GO:0016567)
      negative regulation of NF-kappaB transcription factor activity (GO:0032088)
      protein K29-linked ubiquitination (GO:0035519)
      protein ubiquitination involved in ubiquitin-dependent protein catabolic process (GO:0042787)
      negative regulation of apoptotic process (GO:0043066)
      innate immune response (GO:0045087)
      positive regulation of protein catabolic process (GO:0045732)
      negative regulation of JNK cascade (GO:0046329)
      negative regulation of alpha-beta T cell proliferation (GO:0046642)
      negative regulation of defense response to virus (GO:0050687)
      defense response to virus (GO:0051607)
      protein K63-linked ubiquitination (GO:0070534)
      protein K48-linked ubiquitination (GO:0070936)
      regulation of protein deubiquitination (GO:0090085)
GO_MF
  •   15 Terms
      ubiquitin-protein transferase activity (GO:0004842)
      protein binding (GO:0005515)
      UDP-N-acetylmuramoylalanyl-D-glutamyl-2,6-diaminopimelate-D-alanyl-D-alanine ligase activity (GO:0008766)
      ligase activity (GO:0016874)
      ribosomal S6-glutamic acid ligase activity (GO:0018169)
      ribonucleoprotein complex binding (GO:0043021)
      coenzyme F420-0 gamma-glutamyl ligase activity (GO:0043773)
      coenzyme F420-2 alpha-glutamyl ligase activity (GO:0043774)
      CXCR chemokine receptor binding (GO:0045236)
      protein-glycine ligase activity (GO:0070735)
      protein-glycine ligase activity, initiating (GO:0070736)
      protein-glycine ligase activity, elongating (GO:0070737)
      tubulin-glycine ligase activity (GO:0070738)
      protein-glutamic acid ligase activity (GO:0070739)
      tubulin-glutamic acid ligase activity (GO:0070740)
GO_CC
KEGG
Ver2_FPKM
DBTMEEGeneRefSeqEntrezSPR_FPKMOo_FPKM1C_FPKM2C_FPKM4C_FPKMESC_FPKMMEF_FPKMp1C_FPKMp4C_FPKMiPSC_FPKM
2010690
(v2.0)		ItchNM_001243712,NM_00839516396
12.42633.095746.1869515.57415.84919.601216.294125.3349915.11278.92596
SPR_Histone_Erkek_5KaroundTSS
DBTMEEGeneEntrezH3.3_1_ChIP/InputH3.3_1(Enrich; log2)H3.3_2_ChIP/InputH3.3_2(Enrich; log2)H3K4me3_1_ChIP/InputH3K4me3_1(Enrich; log2)H3K4me3_2_ChIP/InputH3K4me3_2(Enrich; log2)H3K27me3_1_ChIP/InputH3K27me3_1(Enrich; log2)H3K27me3_2_ChIP/InputH3K27me3_2(Enrich; log2)
2010690
(v2.0)		Itch16396
589/420-0.0249419/420-0.1193139/4201.975347/4201.051451/420-0.9703311/420-1.0292
SPR_Histone_Erkek_2KaroundTSS
DBTMEEGeneEntrezH3.3_1_ChIP/InputH3.3_1(Enrich; log2)H3.3_2_ChIP/InputH3.3_2(Enrich; log2)H3K4me3_1_ChIP/InputH3K4me3_1(Enrich; log2)H3K4me3_2_ChIP/InputH3K4me3_2(Enrich; log2)H3K27me3_1_ChIP/InputH3K27me3_1(Enrich; log2)H3K27me3_2_ChIP/InputH3K27me3_2(Enrich; log2)
2010690
(v2.0)		Itch16396
303/1560.4425166/156-0.0264127/1563.2076283/1562.172518/156-1.017778/156-1.5808
SPR_Methy_Kobayashi_5KaroundTSS
DBTMEEGeneEntrezTotal_mC_levelsNumber_of_mCsAveraged_Methylation_level
2010690
(v2.0)		Itch16396
58.780812347.79
SPR_Methy_Kobayashi_2KaroundTSS
DBTMEEGeneEntrezTotal_mC_levelsNumber_of_mCsAveraged_Methylation_level
2010690
(v2.0)		Itch16396
12.1487117.11
SOLiD_OocyteTo4C_FPKM_gene_guided N/A
SOLiD_Illumina_Oo_1C_Sperm_FPKM_gene_guided N/A
SOLiD_Partheno1C_FPKM_gene_guided N/A
SOLiD_Illumina_Oo_p1C_Sperm_FPKM_gene_guided N/A
SOLiD_Partheno4C_FPKM_gene_guided N/A
Illumina_Oo_2C_FPKM_gene_guided N/A
SOLiD_SC_Oo_REPLICA_FPKM_gene_guided N/A
NIA60mer
DBTMEEArray_Feature_NumberOligo_Parent_CloneUnigeneGeneEntrezU_ClusterNAP_ClusterGene_U/NAPTIGRSwissProtESTOo1C2C4C8CMorulaBlastocyst
0010791
(v1.0)		18508L0210G02-3Mm.8975Itch16396
Itch2.73722.59742.51992.32142.74352.66522.7352
MOE430 N/A
Agilent44K N/A
Proteome N/A