DBTMEE
Database of Transcriptome in Mouse Early Embryos


Gene Search:

DBTMEE:2010987
GeneKhdrbs1
Synonymsp62
Sam68
DescriptionKH domain containing, RNA binding, signal transduction associated 1
LocusNR_045036 UCSC: chr4:129380413-129419547(-) OLP: chr4:129380413-129419547(-)
NM_011317 UCSC: chr4:129391061-129419547(-) OLP: chr4:129391061-129419547(-)
DB links


Entrez 20218
MGI 893579
Ensembl ENSMUSG00000028790
Vega OTTMUSG00000009514
Featureprotein-coding
GO_BP
  •   9 Terms
      transcription, DNA-templated (GO:0006351)
      regulation of transcription, DNA-templated (GO:0006355)
      cell cycle (GO:0007049)
      cell surface receptor signaling pathway (GO:0007166)
      positive regulation of signal transduction (GO:0009967)
      negative regulation of transcription, DNA-templated (GO:0045892)
      positive regulation of translational initiation (GO:0045948)
      regulation of RNA export from nucleus (GO:0046831)
      positive regulation of RNA export from nucleus (GO:0046833)
GO_MF
GO_CC
KEGG
Ver2_FPKM
DBTMEEGeneRefSeqEntrezSPR_FPKMOo_FPKM1C_FPKM2C_FPKM4C_FPKMESC_FPKMMEF_FPKMp1C_FPKMp4C_FPKMiPSC_FPKM
2010987
(v2.0)		Khdrbs1NM_011317,NR_04503620218
20.35242.643774.9224714.193911.626523.90319.386334.2419710.263824.9477
SPR_Histone_Erkek_5KaroundTSS
DBTMEEGeneEntrezH3.3_1_ChIP/InputH3.3_1(Enrich; log2)H3.3_2_ChIP/InputH3.3_2(Enrich; log2)H3K4me3_1_ChIP/InputH3K4me3_1(Enrich; log2)H3K4me3_2_ChIP/InputH3K4me3_2(Enrich; log2)H3K27me3_1_ChIP/InputH3K27me3_1(Enrich; log2)H3K27me3_2_ChIP/InputH3K27me3_2(Enrich; log2)
2010987
(v2.0)		Khdrbs120218
693/3720.3838482/3720.2569321/3723.3465740/3722.31577/372-3.4974132/372-2.0815
SPR_Histone_Erkek_2KaroundTSS
DBTMEEGeneEntrezH3.3_1_ChIP/InputH3.3_1(Enrich; log2)H3.3_2_ChIP/InputH3.3_2(Enrich; log2)H3K4me3_1_ChIP/InputH3K4me3_1(Enrich; log2)H3K4me3_2_ChIP/InputH3K4me3_2(Enrich; log2)H3K27me3_1_ChIP/InputH3K27me3_1(Enrich; log2)H3K27me3_2_ChIP/InputH3K27me3_2(Enrich; log2)
2010987
(v2.0)		Khdrbs120218
454/1950.7035285/1950.4294316/1954.215719/1953.19732/195-3.995172/195-2.0141
SPR_Methy_Kobayashi_5KaroundTSS
DBTMEEGeneEntrezTotal_mC_levelsNumber_of_mCsAveraged_Methylation_level
2010987
(v2.0)		Khdrbs120218
34.686517320.05
SPR_Methy_Kobayashi_2KaroundTSS
DBTMEEGeneEntrezTotal_mC_levelsNumber_of_mCsAveraged_Methylation_level
2010987
(v2.0)		Khdrbs120218
9.69971446.74
SOLiD_OocyteTo4C_FPKM_gene_guided N/A
SOLiD_Illumina_Oo_1C_Sperm_FPKM_gene_guided N/A
SOLiD_Partheno1C_FPKM_gene_guided N/A
SOLiD_Illumina_Oo_p1C_Sperm_FPKM_gene_guided N/A
SOLiD_Partheno4C_FPKM_gene_guided N/A
Illumina_Oo_2C_FPKM_gene_guided N/A
SOLiD_SC_Oo_REPLICA_FPKM_gene_guided N/A
NIA60mer
DBTMEEArray_Feature_NumberOligo_Parent_CloneUnigeneGeneEntrezU_ClusterNAP_ClusterGene_U/NAPTIGRSwissProtESTOo1C2C4C8CMorulaBlastocyst
0011078
(v1.0)		2783C0402A10-3Mm.8256Khdrbs120218
U025568NAP096473-001Khdrbs1;Sam68;TC925012,TC800902Q60735U,F,22.61052.8713.51143.72993.03633.16713.0092
MOE430 N/A
Agilent44K N/A
Proteome N/A