DBTMEE
Database of Transcriptome in Mouse Early Embryos


Gene Search:

DBTMEE:2011118
GeneKlhl9
Synonyms
Descriptionkelch-like 9
LocusNM_172871 UCSC: chr4:88364196-88368412(-) OLP: chr4:88364196-88368412(-)
DB links


Entrez 242521
MGI 2180122
Ensembl ENSMUSG00000070923
Vega OTTMUSG00000011283
Featureprotein-coding
GO_BP
GO_MF
  •   1 Terms
      ubiquitin-protein transferase activity (GO:0004842)
GO_CC
KEGG
  •   1 Terms
      Ubiquitin mediated proteolysis (mmu04120)
Ver2_FPKM
Log10 (FPKM+1)
1.349
SPR
1.789
Oo
1.848
1C
1.439
2C
1.104
4C
1.261
ESC
1.66
MEF
1.743
p1C
1.15
p4C
1.297
iPSC
DBTMEEGeneRefSeqEntrezSPR_FPKMOo_FPKM1C_FPKM2C_FPKM4C_FPKMESC_FPKMMEF_FPKMp1C_FPKMp4C_FPKMiPSC_FPKM
2011118
(v2.0)		Klhl9NM_172871242521
21.34260.563369.528426.508411.694817.234644.688654.385813.12518.8155
SPR_Histone_Erkek_5KaroundTSS
Enrichment of Histone Variant and Modification (+/- 5Kb from TSS)
0.108
H3.3
Rep.1
0.155
H3.3
Rep.2
2.192
H3K4me3
Rep.1
1.938
H3K4me3
Rep.2
-0.284
H3K27me3
Rep.1
-0.605
H3K27me3
Rep.2
DBTMEEGeneEntrezH3.3_1_ChIP/InputH3.3_1(Enrich; log2)H3.3_2_ChIP/InputH3.3_2(Enrich; log2)H3K4me3_1_ChIP/InputH3K4me3_1(Enrich; log2)H3K4me3_2_ChIP/InputH3K4me3_2(Enrich; log2)H3K27me3_1_ChIP/InputH3K27me3_1(Enrich; log2)H3K27me3_2_ChIP/InputH3K27me3_2(Enrich; log2)
2011118
(v2.0)		Klhl9242521
586/3810.108460/3810.1553147/3812.1916583/3811.93875/381-0.2836379/381-0.605
SPR_Histone_Erkek_2KaroundTSS
Enrichment of Histone Variant and Modification (+/- 2Kb from TSS)
0.237
H3.3
Rep.1
0.128
H3.3
Rep.2
3.047
H3K4me3
Rep.1
2.672
H3K4me3
Rep.2
-0.448
H3K27me3
Rep.1
-0.825
H3K27me3
Rep.2
DBTMEEGeneEntrezH3.3_1_ChIP/InputH3.3_1(Enrich; log2)H3.3_2_ChIP/InputH3.3_2(Enrich; log2)H3K4me3_1_ChIP/InputH3K4me3_1(Enrich; log2)H3K4me3_2_ChIP/InputH3K4me3_2(Enrich; log2)H3K27me3_1_ChIP/InputH3K27me3_1(Enrich; log2)H3K27me3_2_ChIP/InputH3K27me3_2(Enrich; log2)
2011118
(v2.0)		Klhl9242521
318/1890.2367224/1890.1283136/1893.0471484/1892.671833/189-0.4484161/189-0.8248
SPR_Methy_Kobayashi_5KaroundTSS
DBTMEEGeneEntrezTotal_mC_levelsNumber_of_mCsAveraged_Methylation_level
2011118
(v2.0)		Klhl9242521
54.664211248.81
SPR_Methy_Kobayashi_2KaroundTSS
DBTMEEGeneEntrezTotal_mC_levelsNumber_of_mCsAveraged_Methylation_level
2011118
(v2.0)		Klhl9242521
23.93897930.3
SOLiD_OocyteTo4C_FPKM_gene_guided N/A
SOLiD_Illumina_Oo_1C_Sperm_FPKM_gene_guided N/A
SOLiD_Partheno1C_FPKM_gene_guided N/A
SOLiD_Illumina_Oo_p1C_Sperm_FPKM_gene_guided N/A
SOLiD_Partheno4C_FPKM_gene_guided N/A
Illumina_Oo_2C_FPKM_gene_guided N/A
SOLiD_SC_Oo_REPLICA_FPKM_gene_guided N/A
NIA60mer N/A
MOE430 N/A
Agilent44K N/A
Proteome N/A