DBTMEE
Database of Transcriptome in Mouse Early Embryos


Gene Search:

DBTMEE:2011739
GeneLrrc28
Synonyms
Descriptionleucine rich repeat containing 28
LocusNM_175124 UCSC: chr7:74658296-74790122(-) OLP: chr7:74658296-74790122(-)
NR_028144 UCSC: chr7:74658296-74790122(-) OLP: chr7:74658296-74790122(-)
NR_028143 UCSC: chr7:74658296-74790122(-) OLP: chr7:74658296-74790122(-)
NM_027413 UCSC: chr7:74739285-74790122(-) OLP: chr7:74739285-74790122(-)
DB links


Entrez 67867
MGI 1915689
Ensembl ENSMUSG00000030556
Featureprotein-coding
GO_BP
GO_MF
GO_CC
KEGG
Ver2_FPKM
DBTMEEGeneRefSeqEntrezSPR_FPKMOo_FPKM1C_FPKM2C_FPKM4C_FPKMESC_FPKMMEF_FPKMp1C_FPKMp4C_FPKMiPSC_FPKM
2011739
(v2.0)		Lrrc28NM_027413,NM_175124,NR_028143,NR_02814467867
59.126599.1376120.99118.35438.492733.988664.11639120.5959.967645.59592
SPR_Histone_Erkek_5KaroundTSS
DBTMEEGeneEntrezH3.3_1_ChIP/InputH3.3_1(Enrich; log2)H3.3_2_ChIP/InputH3.3_2(Enrich; log2)H3K4me3_1_ChIP/InputH3K4me3_1(Enrich; log2)H3K4me3_2_ChIP/InputH3K4me3_2(Enrich; log2)H3K27me3_1_ChIP/InputH3K27me3_1(Enrich; log2)H3K27me3_2_ChIP/InputH3K27me3_2(Enrich; log2)
2011739
(v2.0)		Lrrc2867867
628/3840.1964513/3840.3009309/3843.2473812/3842.40460/384-0.612386/384-0.59
SPR_Histone_Erkek_2KaroundTSS
DBTMEEGeneEntrezH3.3_1_ChIP/InputH3.3_1(Enrich; log2)H3.3_2_ChIP/InputH3.3_2(Enrich; log2)H3K4me3_1_ChIP/InputH3K4me3_1(Enrich; log2)H3K4me3_2_ChIP/InputH3K4me3_2(Enrich; log2)H3K27me3_1_ChIP/InputH3K27me3_1(Enrich; log2)H3K27me3_2_ChIP/InputH3K27me3_2(Enrich; log2)
2011739
(v2.0)		Lrrc2867867
295/1710.2725236/1710.3468293/1714.284736/1713.417918/171-1.1468100/171-1.3601
SPR_Methy_Kobayashi_5KaroundTSS
DBTMEEGeneEntrezTotal_mC_levelsNumber_of_mCsAveraged_Methylation_level
2011739
(v2.0)		Lrrc2867867
57.220814040.87
SPR_Methy_Kobayashi_2KaroundTSS
DBTMEEGeneEntrezTotal_mC_levelsNumber_of_mCsAveraged_Methylation_level
2011739
(v2.0)		Lrrc2867867
15.1468717.41
SOLiD_OocyteTo4C_FPKM_gene_guided N/A
SOLiD_Illumina_Oo_1C_Sperm_FPKM_gene_guided N/A
SOLiD_Partheno1C_FPKM_gene_guided N/A
SOLiD_Illumina_Oo_p1C_Sperm_FPKM_gene_guided N/A
SOLiD_Partheno4C_FPKM_gene_guided N/A
Illumina_Oo_2C_FPKM_gene_guided N/A
SOLiD_SC_Oo_REPLICA_FPKM_gene_guided N/A
NIA60mer N/A
MOE430 N/A
Agilent44K N/A
Proteome N/A