DBTMEE
Database of Transcriptome in Mouse Early Embryos


Gene Search:

DBTMEE:2011750
GeneLrrc40
Synonyms
Descriptionleucine rich repeat containing 40
LocusNM_001289525 UCSC: chr3:157699646-157730054(+) OLP: chr3:157699646-157730054(+)
NM_001289524 UCSC: chr3:157699646-157730054(+) OLP: chr3:157699646-157730054(+)
NM_024194 UCSC: chr3:157699646-157730054(+) OLP: chr3:157699646-157730054(+)
DB links


Entrez 67144
MGI 1914394
Ensembl ENSMUSG00000063052
Vega OTTMUSG00000031933
Featureprotein-coding
GO_BP
GO_MF
GO_CC
KEGG
Ver2_FPKM
DBTMEEGeneRefSeqEntrezSPR_FPKMOo_FPKM1C_FPKM2C_FPKM4C_FPKMESC_FPKMMEF_FPKMp1C_FPKMp4C_FPKMiPSC_FPKM
2011750
(v2.0)		Lrrc40NM_001289524,NM_001289525,NM_02419467144
4.7514468.7821159.27266.977725.736626.718321.6579125.44932.32326.35
SPR_Histone_Erkek_5KaroundTSS
DBTMEEGeneEntrezH3.3_1_ChIP/InputH3.3_1(Enrich; log2)H3.3_2_ChIP/InputH3.3_2(Enrich; log2)H3K4me3_1_ChIP/InputH3K4me3_1(Enrich; log2)H3K4me3_2_ChIP/InputH3K4me3_2(Enrich; log2)H3K27me3_1_ChIP/InputH3K27me3_1(Enrich; log2)H3K27me3_2_ChIP/InputH3K27me3_2(Enrich; log2)
2011750
(v2.0)		Lrrc4067144
833/3550.7161691/3550.84291152/3555.25214460/3554.972615/355-2.4307147/355-1.8606
SPR_Histone_Erkek_2KaroundTSS
DBTMEEGeneEntrezH3.3_1_ChIP/InputH3.3_1(Enrich; log2)H3.3_2_ChIP/InputH3.3_2(Enrich; log2)H3K4me3_1_ChIP/InputH3K4me3_1(Enrich; log2)H3K4me3_2_ChIP/InputH3K4me3_2(Enrich; log2)H3K27me3_1_ChIP/InputH3K27me3_1(Enrich; log2)H3K27me3_2_ChIP/InputH3K27me3_2(Enrich; log2)
2011750
(v2.0)		Lrrc4067144
376/1450.8574349/1451.1455697/1455.75232451/1455.38639/145-1.84164/145-1.7554
SPR_Methy_Kobayashi_5KaroundTSS
DBTMEEGeneEntrezTotal_mC_levelsNumber_of_mCsAveraged_Methylation_level
2011750
(v2.0)		Lrrc4067144
37.496511034.09
SPR_Methy_Kobayashi_2KaroundTSS
DBTMEEGeneEntrezTotal_mC_levelsNumber_of_mCsAveraged_Methylation_level
2011750
(v2.0)		Lrrc4067144
14.1166521.72
SOLiD_OocyteTo4C_FPKM_gene_guided N/A
SOLiD_Illumina_Oo_1C_Sperm_FPKM_gene_guided N/A
SOLiD_Partheno1C_FPKM_gene_guided N/A
SOLiD_Illumina_Oo_p1C_Sperm_FPKM_gene_guided N/A
SOLiD_Partheno4C_FPKM_gene_guided N/A
Illumina_Oo_2C_FPKM_gene_guided N/A
SOLiD_SC_Oo_REPLICA_FPKM_gene_guided N/A
NIA60mer N/A
MOE430 N/A
Agilent44K N/A
Proteome N/A