DBTMEE
Database of Transcriptome in Mouse Early Embryos


Gene Search:

DBTMEE:2011816
GeneLsm2
SynonymsD17H6S56E-2
D17H6S56E2
Dmapl
Dmpkap
G7b
Sm-X5
SmX5
snRNP
DescriptionLSM2 homolog, U6 small nuclear RNA associated (S. cerevisiae)
LocusNM_001110101 UCSC: chr17:35118799-35122838(+) OLP: chr17:35118799-35122838(+)
NM_001204274 UCSC: chr17:35118799-35122836(+) OLP: chr17:35118799-35122836(+)
NM_030597 UCSC: chr17:35119075-35122838(+) OLP: chr17:35119075-35122838(+)
NM_001204273 UCSC: chr17:35119075-35122836(+) OLP: chr17:35119075-35122836(+)
DB links


Entrez 27756
MGI 90676
Ensembl ENSMUSG00000007050
Vega OTTMUSG00000037141
Featureprotein-coding
GO_BP
GO_MF
GO_CC
KEGG
Ver2_FPKM
DBTMEEGeneRefSeqEntrezSPR_FPKMOo_FPKM1C_FPKM2C_FPKM4C_FPKMESC_FPKMMEF_FPKMp1C_FPKMp4C_FPKMiPSC_FPKM
2011816
(v2.0)		Lsm2NM_001110101,NM_001204273,NM_001204274,NM_03059727756
21.313535.899936.136682.184299.382984.552138.13158.977996.144597.8802
SPR_Histone_Erkek_5KaroundTSS
DBTMEEGeneEntrezH3.3_1_ChIP/InputH3.3_1(Enrich; log2)H3.3_2_ChIP/InputH3.3_2(Enrich; log2)H3K4me3_1_ChIP/InputH3K4me3_1(Enrich; log2)H3K4me3_2_ChIP/InputH3K4me3_2(Enrich; log2)H3K27me3_1_ChIP/InputH3K27me3_1(Enrich; log2)H3K27me3_2_ChIP/InputH3K27me3_2(Enrich; log2)
2011816
(v2.0)		Lsm227756
704/4140.2526455/4140.02289/4143.04581119/4142.758331/414-1.6501245/414-1.3508
SPR_Histone_Erkek_2KaroundTSS
DBTMEEGeneEntrezH3.3_1_ChIP/InputH3.3_1(Enrich; log2)H3.3_2_ChIP/InputH3.3_2(Enrich; log2)H3K4me3_1_ChIP/InputH3K4me3_1(Enrich; log2)H3K4me3_2_ChIP/InputH3K4me3_2(Enrich; log2)H3K27me3_1_ChIP/InputH3K27me3_1(Enrich; log2)H3K27me3_2_ChIP/InputH3K27me3_2(Enrich; log2)
2011816
(v2.0)		Lsm227756
317/1630.4444215/1630.2817153/1633.4155588/1633.16269/163-2.005475/163-1.6992
SPR_Methy_Kobayashi_5KaroundTSS
DBTMEEGeneEntrezTotal_mC_levelsNumber_of_mCsAveraged_Methylation_level
2011816
(v2.0)		Lsm227756
65.355325126.04
SPR_Methy_Kobayashi_2KaroundTSS
DBTMEEGeneEntrezTotal_mC_levelsNumber_of_mCsAveraged_Methylation_level
2011816
(v2.0)		Lsm227756
18.205510717.01
SOLiD_OocyteTo4C_FPKM_gene_guided N/A
SOLiD_Illumina_Oo_1C_Sperm_FPKM_gene_guided N/A
SOLiD_Partheno1C_FPKM_gene_guided N/A
SOLiD_Illumina_Oo_p1C_Sperm_FPKM_gene_guided N/A
SOLiD_Partheno4C_FPKM_gene_guided N/A
Illumina_Oo_2C_FPKM_gene_guided N/A
SOLiD_SC_Oo_REPLICA_FPKM_gene_guided N/A
NIA60mer N/A
MOE430 N/A
Agilent44K N/A
Proteome N/A