DBTMEE
Database of Transcriptome in Mouse Early Embryos


Gene Search:

DBTMEE:2014111
GeneNacc1
SynonymsBtbd14b
Nac1
Descriptionnucleus accumbens associated 1, BEN and BTB (POZ) domain containing
LocusNM_025788 UCSC: chr8:87194378-87211761(-) OLP: chr8:87194378-87211761(-)
DB links


Entrez 66830
MGI 1914080
Ensembl ENSMUSG00000001910
Featureprotein-coding
GO_BP
  •   5 Terms
      transcription, DNA-templated (GO:0006351)
      regulation of transcription, DNA-templated (GO:0006355)
      positive regulation of cell proliferation (GO:0008284)
      negative regulation of transcription, DNA-templated (GO:0045892)
      protein homooligomerization (GO:0051260)
GO_MF
GO_CC
KEGG
Ver2_FPKM
Log10 (FPKM+1)
1.393
SPR
1.488
Oo
1.731
1C
1.481
2C
1.381
4C
1.686
ESC
1.567
MEF
1.942
p1C
1.397
p4C
1.586
iPSC
DBTMEEGeneRefSeqEntrezSPR_FPKMOo_FPKM1C_FPKM2C_FPKM4C_FPKMESC_FPKMMEF_FPKMp1C_FPKMp4C_FPKMiPSC_FPKM
2014111
(v2.0)		Nacc1NM_02578866830
23.734529.739952.828629.303623.049247.543835.940286.495623.935637.5532
SPR_Histone_Erkek_5KaroundTSS
Enrichment of Histone Variant and Modification (+/- 5Kb from TSS)
-0.05
H3.3
Rep.1
-0.439
H3.3
Rep.2
0.981
H3K4me3
Rep.1
0.264
H3K4me3
Rep.2
-2.897
H3K27me3
Rep.1
-2.495
H3K27me3
Rep.2
DBTMEEGeneEntrezH3.3_1_ChIP/InputH3.3_1(Enrich; log2)H3.3_2_ChIP/InputH3.3_2(Enrich; log2)H3K4me3_1_ChIP/InputH3K4me3_1(Enrich; log2)H3K4me3_2_ChIP/InputH3K4me3_2(Enrich; log2)H3K27me3_1_ChIP/InputH3K27me3_1(Enrich; log2)H3K27me3_2_ChIP/InputH3K27me3_2(Enrich; log2)
2014111
(v2.0)		Nacc166830
678/492-0.0501393/492-0.439381/4920.981235/4920.264115/492-2.8969131/492-2.4948
SPR_Histone_Erkek_2KaroundTSS
Enrichment of Histone Variant and Modification (+/- 2Kb from TSS)
0.349
H3.3
Rep.1
-0.255
H3.3
Rep.2
2.362
H3K4me3
Rep.1
1.625
H3K4me3
Rep.2
-3.818
H3K27me3
Rep.1
-2.494
H3K27me3
Rep.2
DBTMEEGeneEntrezH3.3_1_ChIP/InputH3.3_1(Enrich; log2)H3.3_2_ChIP/InputH3.3_2(Enrich; log2)H3K4me3_1_ChIP/InputH3K4me3_1(Enrich; log2)H3K4me3_2_ChIP/InputH3K4me3_2(Enrich; log2)H3K27me3_1_ChIP/InputH3K27me3_1(Enrich; log2)H3K27me3_2_ChIP/InputH3K27me3_2(Enrich; log2)
2014111
(v2.0)		Nacc166830
313/1720.3491156/172-0.255477/1722.3619213/1721.62552/172-3.81845/172-2.4944
SPR_Methy_Kobayashi_5KaroundTSS
DBTMEEGeneEntrezTotal_mC_levelsNumber_of_mCsAveraged_Methylation_level
2014111
(v2.0)		Nacc166830
52.575615134.82
SPR_Methy_Kobayashi_2KaroundTSS
DBTMEEGeneEntrezTotal_mC_levelsNumber_of_mCsAveraged_Methylation_level
2014111
(v2.0)		Nacc166830
13.745210213.48
SOLiD_OocyteTo4C_FPKM_gene_guided N/A
SOLiD_Illumina_Oo_1C_Sperm_FPKM_gene_guided N/A
SOLiD_Partheno1C_FPKM_gene_guided N/A
SOLiD_Illumina_Oo_p1C_Sperm_FPKM_gene_guided N/A
SOLiD_Partheno4C_FPKM_gene_guided N/A
Illumina_Oo_2C_FPKM_gene_guided N/A
SOLiD_SC_Oo_REPLICA_FPKM_gene_guided N/A
NIA60mer N/A
MOE430 N/A
Agilent44K N/A
Proteome N/A