DBTMEE

DBTMEE
Database of Transcriptome in Mouse Early Embryos

DBTMEE:2014203

Gene

Ncoa4

Synonyms

Description

nuclear receptor coactivator 4

Locus

NM_001033988 UCSC: chr14:32973073-32993041(+) OLP: chr14:32973073-32993041(+)
NM_001284319 UCSC: chr14:32978772-32993041(+) OLP: chr14:32978772-32993041(+)
NM_019744 UCSC: chr14:32978975-32993041(+) OLP: chr14:32978975-32993041(+)

DB links

Entrez 27057
MGI 1350932
Ensembl ENSMUSG00000056234
Vega OTTMUSG00000036491

Feature

protein-coding

GO_BP

GO_MF

GO_CC

1 Terms

KEGG

2 Terms

DBTMEE	Gene	RefSeq	Entrez	SPR_FPKM	Oo_FPKM	1C_FPKM	2C_FPKM	4C_FPKM	ESC_FPKM	MEF_FPKM	p1C_FPKM	p4C_FPKM	iPSC_FPKM
2014203 (v2.0)	Ncoa4	NM_001033988,NM_001284319,NM_019744	27057	75.4866	133.782	294.461	25.4329	29.6744	45.5756	31.1771	255.98	27.5353	39.4512

SPR_Histone_Erkek_5KaroundTSS

DBTMEE	Gene	Entrez	H3.3_1_ChIP/Input	H3.3_1(Enrich; log2)	H3.3_2_ChIP/Input	H3.3_2(Enrich; log2)	H3K4me3_1_ChIP/Input	H3K4me3_1(Enrich; log2)	H3K4me3_2_ChIP/Input	H3K4me3_2(Enrich; log2)	H3K27me3_1_ChIP/Input	H3K27me3_1(Enrich; log2)	H3K27me3_2_ChIP/Input	H3K27me3_2(Enrich; log2)
2014203 (v2.0)	Ncoa4	27057	691/499	-0.0431	392/499	-0.4633	106/499	1.345	260/499	0.389	48/499	-1.3024	410/499	-0.8803

SPR_Histone_Erkek_2KaroundTSS

DBTMEE	Gene	Entrez	H3.3_1_ChIP/Input	H3.3_1(Enrich; log2)	H3.3_2_ChIP/Input	H3.3_2(Enrich; log2)	H3K4me3_1_ChIP/Input	H3K4me3_1(Enrich; log2)	H3K4me3_2_ChIP/Input	H3K4me3_2(Enrich; log2)	H3K27me3_1_ChIP/Input	H3K27me3_1(Enrich; log2)	H3K27me3_2_ChIP/Input	H3K27me3_2(Enrich; log2)
2014203 (v2.0)	Ncoa4	27057	291/208	-0.0282	144/208	-0.6428	101/208	2.4913	231/208	1.4715	9/208	-2.3493	71/208	-2.1265

SPR_Methy_Kobayashi_5KaroundTSS

DBTMEE	Gene	Entrez	Total_mC_levels	Number_of_mCs	Averaged_Methylation_level
2014203 (v2.0)	Ncoa4	27057	69.2625	132	52.47

SPR_Methy_Kobayashi_2KaroundTSS

DBTMEE	Gene	Entrez	Total_mC_levels	Number_of_mCs	Averaged_Methylation_level
2014203 (v2.0)	Ncoa4	27057	24.7674	85	29.14

SOLiD_OocyteTo4C_FPKM_gene_guided

N/A

SOLiD_Illumina_Oo_1C_Sperm_FPKM_gene_guided

N/A

SOLiD_Partheno1C_FPKM_gene_guided

N/A

SOLiD_Illumina_Oo_p1C_Sperm_FPKM_gene_guided

N/A

SOLiD_Partheno4C_FPKM_gene_guided

N/A

Illumina_Oo_2C_FPKM_gene_guided

N/A

SOLiD_SC_Oo_REPLICA_FPKM_gene_guided

N/A

DBTMEE	Array_Feature_Number	Oligo_Parent_Clone	Unigene	Gene	Entrez	U_Cluster	NAP_Cluster	Gene_U/NAP	TIGR	SwissProt	EST	Oo	1C	2C	4C	8C	Morula	Blastocyst
0013751 (v1.0)	6576	H3028F10-3	Mm.28261	Ncoa4	27057	U015473	NAP090240-1	Ncoa4;	TC852501,TC809974	Q9WV42	U,F,2	4.5725	4.4143	3.4868	3.2103	3.2446	3.3536	3.3578

N/A

N/A

N/A