DBTMEE:2014207
| Gene | Ncor1 |
| Synonyms | N-CoR
Rxrip13 |
| Description | nuclear receptor co-repressor 1 |
| Locus | NM_001252313 UCSC: chr11:62129928-62252017(-) OLP: chr11:62129928-62252017(-)
NM_011308 UCSC: chr11:62129928-62252017(-) OLP: chr11:62129928-62252017(-)
NM_177229 UCSC: chr11:62214879-62270834(-) OLP: chr11:62214879-62270834(-)
|
| DB links |
Entrez 20185
MGI 1349717
Ensembl ENSMUSG00000018501
Vega OTTMUSG00000005855
|
| Feature | protein-coding |
| GO_BP |
-
 22 Terms
negative regulation of transcription from RNA polymerase II promoter (GO:0000122)
CD4-positive, CD25-positive, alpha-beta regulatory T cell differentiation (GO:0002361)
transcription, DNA-templated (GO:0006351)
regulation of transcription, DNA-templated (GO:0006355)
regulation of transcription from RNA polymerase II promoter (GO:0006357)
positive regulation of cell proliferation (GO:0008284)
negative regulation of gene expression (GO:0010629)
negative regulation of phosphatidylinositol 3-kinase signaling (GO:0014067)
chromatin modification (GO:0016568)
thalamus development (GO:0021794)
regulation of histone deacetylation (GO:0031063)
positive regulation of histone deacetylation (GO:0031065)
circadian regulation of gene expression (GO:0032922)
regulation of multicellular organism growth (GO:0040014)
cholesterol homeostasis (GO:0042632)
negative regulation of transcription, DNA-templated (GO:0045892)
negative regulation of JNK cascade (GO:0046329)
regulation of catalytic activity (GO:0050790)
spindle assembly (GO:0051225)
definitive erythrocyte differentiation (GO:0060318)
regulation of glycolytic process by negative regulation of transcription from RNA polymerase II promoter (GO:0072362)
regulation of lipid transport by negative regulation of transcription from RNA polymerase II promoter (GO:0072368)
|
| GO_MF |
-
18 Terms
|
| GO_CC |
-
9 Terms
|
| KEGG | |
| Ver2_FPKM |
| DBTMEE | Gene | RefSeq | Entrez | SPR_FPKM | Oo_FPKM | 1C_FPKM | 2C_FPKM | 4C_FPKM | ESC_FPKM | MEF_FPKM | p1C_FPKM | p4C_FPKM | iPSC_FPKM |
|---|
2014207
(v2.0) | Ncor1 | NM_001252313,NM_011308,NM_177229 | 20185
| 14.8728 | 9.76129 | 22.8156 | 16.8078 | 14.8808 | 16.0595 | 24.9897 | 25.5409 | 13.3156 | 11.5606 |
|
| SPR_Histone_Erkek_5KaroundTSS |
| DBTMEE | Gene | Entrez | H3.3_1_ChIP/Input | H3.3_1(Enrich; log2) | H3.3_2_ChIP/Input | H3.3_2(Enrich; log2) | H3K4me3_1_ChIP/Input | H3K4me3_1(Enrich; log2) | H3K4me3_2_ChIP/Input | H3K4me3_2(Enrich; log2) | H3K27me3_1_ChIP/Input | H3K27me3_1(Enrich; log2) | H3K27me3_2_ChIP/Input | H3K27me3_2(Enrich; log2) |
|---|
2014207
(v2.0) | Ncor1 | 20185
| 720/293 | 0.7822 | 483/293 | 0.6032 | 289/293 | 3.5277 | 706/293 | 2.5898 | 11/293 | -2.5724 | 105/293 | -2.0641 |
|
| SPR_Histone_Erkek_2KaroundTSS |
| DBTMEE | Gene | Entrez | H3.3_1_ChIP/Input | H3.3_1(Enrich; log2) | H3.3_2_ChIP/Input | H3.3_2(Enrich; log2) | H3K4me3_1_ChIP/Input | H3K4me3_1(Enrich; log2) | H3K4me3_2_ChIP/Input | H3K4me3_2(Enrich; log2) | H3K27me3_1_ChIP/Input | H3K27me3_1(Enrich; log2) | H3K27me3_2_ChIP/Input | H3K27me3_2(Enrich; log2) |
|---|
2014207
(v2.0) | Ncor1 | 20185
| 448/152 | 1.0417 | 267/152 | 0.693 | 283/152 | 4.3921 | 651/152 | 3.4084 | 3/152 | -3.2291 | 59/152 | -1.9375 |
|
| SPR_Methy_Kobayashi_5KaroundTSS |
| DBTMEE | Gene | Entrez | Total_mC_levels | Number_of_mCs | Averaged_Methylation_level |
|---|
2014207
(v2.0) | Ncor1 | 20185
| 38.1665 | 150 | 25.44 |
|
| SPR_Methy_Kobayashi_2KaroundTSS |
| DBTMEE | Gene | Entrez | Total_mC_levels | Number_of_mCs | Averaged_Methylation_level |
|---|
2014207
(v2.0) | Ncor1 | 20185
| 9.3362 | 117 | 7.98 |
|
| SOLiD_OocyteTo4C_FPKM_gene_guided |
N/A |
| SOLiD_Illumina_Oo_1C_Sperm_FPKM_gene_guided |
N/A |
| SOLiD_Partheno1C_FPKM_gene_guided |
N/A |
| SOLiD_Illumina_Oo_p1C_Sperm_FPKM_gene_guided |
N/A |
| SOLiD_Partheno4C_FPKM_gene_guided |
N/A |
| Illumina_Oo_2C_FPKM_gene_guided |
N/A |
| SOLiD_SC_Oo_REPLICA_FPKM_gene_guided |
N/A |
| NIA60mer |
| DBTMEE | Array_Feature_Number | Oligo_Parent_Clone | Unigene | Gene | Entrez | U_Cluster | NAP_Cluster | Gene_U/NAP | TIGR | SwissProt | EST | Oo | 1C | 2C | 4C | 8C | Morula | Blastocyst |
|---|
0013755
(v1.0) | 8682 | H3070A10-3 | Mm.88061 | Ncor1 | 20185
| U032901 | NAP095522-001 | Ncor1; | TC819665 | Q60974 | U,F,2 | 3.1787 | 3.1763 | 3.1827 | 3.0332 | 2.9454 | 2.9912 | 3.1509 |
0013755
(v1.0) | 17225 | K0543F03-3 | Mm.88061 | Ncor1 | 20185
| | | | | | | 2.5152 | 2.6168 | 2.9215 | 2.4817 | 2.4724 | 2.617 | 2.5895 |
0013755
(v1.0) | 19239 | L0259F09-3 | Mm.88061 | Ncor1 | 20185
| U032901 | NAP095509-001 | Ncor1; | TC893338,TC893337,TC827114 | Q60974 | U,F,2 | 3.2679 | 3.0243 | 2.7988 | 3.0362 | 2.723 | 3.0861 | 3.3031 |
|
| MOE430 |
N/A |
| Agilent44K |
N/A |
| Proteome |
N/A |
