DBTMEE
Database of Transcriptome in Mouse Early Embryos


Gene Search:

DBTMEE:2014373
GeneNfya
SynonymsCbf-b
Sez10
Descriptionnuclear transcription factor-Y alpha
LocusNM_001110832 UCSC: chr17:48526210-48549145(-) OLP: chr17:48526210-48549145(-)
NM_010913 UCSC: chr17:48526210-48549145(-) OLP: chr17:48526210-48549145(-)
DB links


Entrez 18044
MGI 97316
Ensembl ENSMUSG00000023994
Vega OTTMUSG00000035112
Featureprotein-coding
GO_BP
  •   6 Terms
      transcription, DNA-templated (GO:0006351)
      regulation of transcription, DNA-templated (GO:0006355)
      positive regulation of transcription, DNA-templated (GO:0045893)
      positive regulation of transcription from RNA polymerase II promoter (GO:0045944)
      regulation of stem cell maintenance (GO:2000036)
      positive regulation of stem cell proliferation (GO:2000648)
GO_MF
  •   8 Terms
      RNA polymerase II core promoter proximal region sequence-specific DNA binding (GO:0000978)
      RNA polymerase II core promoter proximal region sequence-specific DNA binding transcription factor activity involved in positive regulation of transcription (GO:0001077)
      transcription cofactor binding (GO:0001221)
      DNA binding (GO:0003677)
      sequence-specific DNA binding transcription factor activity (GO:0003700)
      protein binding (GO:0005515)
      transcription factor binding (GO:0008134)
      transcription regulatory region DNA binding (GO:0044212)
GO_CC
KEGG
  •   1 Terms
      Antigen processing and presentation (mmu04612)
Ver2_FPKM
DBTMEEGeneRefSeqEntrezSPR_FPKMOo_FPKM1C_FPKM2C_FPKM4C_FPKMESC_FPKMMEF_FPKMp1C_FPKMp4C_FPKMiPSC_FPKM
2014373
(v2.0)		NfyaNM_001110832,NM_01091318044
18.4253240.0795.433527.006127.611513.887215.595102.71927.345513.1646
SPR_Histone_Erkek_5KaroundTSS
DBTMEEGeneEntrezH3.3_1_ChIP/InputH3.3_1(Enrich; log2)H3.3_2_ChIP/InputH3.3_2(Enrich; log2)H3K4me3_1_ChIP/InputH3K4me3_1(Enrich; log2)H3K4me3_2_ChIP/InputH3K4me3_2(Enrich; log2)H3K27me3_1_ChIP/InputH3K27me3_1(Enrich; log2)H3K27me3_2_ChIP/InputH3K27me3_2(Enrich; log2)
2014373
(v2.0)		Nfya18044
801/4230.4075484/4230.078689/4234.26621795/4233.408813/423-2.8735106/423-2.5789
SPR_Histone_Erkek_2KaroundTSS
DBTMEEGeneEntrezH3.3_1_ChIP/InputH3.3_1(Enrich; log2)H3.3_2_ChIP/InputH3.3_2(Enrich; log2)H3K4me3_1_ChIP/InputH3K4me3_1(Enrich; log2)H3K4me3_2_ChIP/InputH3K4me3_2(Enrich; log2)H3K27me3_1_ChIP/InputH3K27me3_1(Enrich; log2)H3K27me3_2_ChIP/InputH3K27me3_2(Enrich; log2)
2014373
(v2.0)		Nfya18044
472/1631.0166272/1630.6194658/1635.51291642/1634.64265/163-2.742452/163-2.215
SPR_Methy_Kobayashi_5KaroundTSS
DBTMEEGeneEntrezTotal_mC_levelsNumber_of_mCsAveraged_Methylation_level
2014373
(v2.0)		Nfya18044
55.73817931.14
SPR_Methy_Kobayashi_2KaroundTSS
DBTMEEGeneEntrezTotal_mC_levelsNumber_of_mCsAveraged_Methylation_level
2014373
(v2.0)		Nfya18044
14.129913410.54
SOLiD_OocyteTo4C_FPKM_gene_guided N/A
SOLiD_Illumina_Oo_1C_Sperm_FPKM_gene_guided N/A
SOLiD_Partheno1C_FPKM_gene_guided N/A
SOLiD_Illumina_Oo_p1C_Sperm_FPKM_gene_guided N/A
SOLiD_Partheno4C_FPKM_gene_guided N/A
Illumina_Oo_2C_FPKM_gene_guided N/A
SOLiD_SC_Oo_REPLICA_FPKM_gene_guided N/A
NIA60mer
DBTMEEArray_Feature_NumberOligo_Parent_CloneUnigeneGeneEntrezU_ClusterNAP_ClusterGene_U/NAPTIGRSwissProtESTOo1C2C4C8CMorulaBlastocyst
0013918
(v1.0)		21118L0834A10-3Mm.4929Nfya18044
U037898NAP006651-001Nfya;TC942077P23708U,F3.80833.74433.33363.2943.35393.31543.256
MOE430 N/A
Agilent44K N/A
Proteome N/A