DBTMEE
Database of Transcriptome in Mouse Early Embryos


Gene Search:

DBTMEE:2014477
GeneNlrp9b
SynonymsNalp-delta
Nalp9b
DescriptionNLR family, pyrin domain containing 9B
LocusNM_194058 UCSC: chr7:20593372-20648287(+) OLP: chr7:20593372-20648287(+)
DB links


Entrez 243874
MGI 2675377
Ensembl ENSMUSG00000060508
Vega OTTMUSG00000027189
Featureprotein-coding
GO_BP
GO_MF
GO_CC
KEGG
Ver2_FPKM
Log10 (FPKM+1)
0.109
SPR
2.491
Oo
2.461
1C
1.1
2C
0.793
4C
0.082
ESC
0.03
MEF
2.296
p1C
1.141
p4C
0.016
iPSC
DBTMEEGeneRefSeqEntrezSPR_FPKMOo_FPKM1C_FPKM2C_FPKM4C_FPKMESC_FPKMMEF_FPKMp1C_FPKMp4C_FPKMiPSC_FPKM
2014477
(v2.0)		Nlrp9bNM_194058243874
0.285747308.692288.02711.58625.207360.2071090.0720835196.7312.83450.0374602
SPR_Histone_Erkek_5KaroundTSS
Enrichment of Histone Variant and Modification (+/- 5Kb from TSS)
0.037
H3.3
Rep.1
0.047
H3.3
Rep.2
-3.761
H3K4me3
Rep.1
-1.181
H3K4me3
Rep.2
0.538
H3K27me3
Rep.1
0.768
H3K27me3
Rep.2
DBTMEEGeneEntrezH3.3_1_ChIP/InputH3.3_1(Enrich; log2)H3.3_2_ChIP/InputH3.3_2(Enrich; log2)H3K4me3_1_ChIP/InputH3K4me3_1(Enrich; log2)H3K4me3_2_ChIP/InputH3K4me3_2(Enrich; log2)H3K27me3_1_ChIP/InputH3K27me3_1(Enrich; log2)H3K27me3_2_ChIP/InputH3K27me3_2(Enrich; log2)
2014477
(v2.0)		Nlrp9b243874
464/3170.0367355/3170.0471/317-3.761555/317-1.1811111/3170.538819/3170.7682
SPR_Histone_Erkek_2KaroundTSS
Enrichment of Histone Variant and Modification (+/- 2Kb from TSS)
0.078
H3.3
Rep.1
0.165
H3.3
Rep.2
-2.843
H3K4me3
Rep.1
-1.387
H3K4me3
Rep.2
0.514
H3K27me3
Rep.1
0.858
H3K27me3
Rep.2
DBTMEEGeneEntrezH3.3_1_ChIP/InputH3.3_1(Enrich; log2)H3.3_2_ChIP/InputH3.3_2(Enrich; log2)H3K4me3_1_ChIP/InputH3K4me3_1(Enrich; log2)H3K4me3_2_ChIP/InputH3K4me3_2(Enrich; log2)H3K27me3_1_ChIP/InputH3K27me3_1(Enrich; log2)H3K27me3_2_ChIP/InputH3K27me3_2(Enrich; log2)
2014477
(v2.0)		Nlrp9b243874
244/1620.0776197/1620.1651/162-2.84324/162-1.386956/1620.5142446/1620.8577
SPR_Methy_Kobayashi_5KaroundTSS
DBTMEEGeneEntrezTotal_mC_levelsNumber_of_mCsAveraged_Methylation_level
2014477
(v2.0)		Nlrp9b243874
38.15294193.06
SPR_Methy_Kobayashi_2KaroundTSS
DBTMEEGeneEntrezTotal_mC_levelsNumber_of_mCsAveraged_Methylation_level
2014477
(v2.0)		Nlrp9b243874
19.52952097.65
SOLiD_OocyteTo4C_FPKM_gene_guided N/A
SOLiD_Illumina_Oo_1C_Sperm_FPKM_gene_guided N/A
SOLiD_Partheno1C_FPKM_gene_guided N/A
SOLiD_Illumina_Oo_p1C_Sperm_FPKM_gene_guided N/A
SOLiD_Partheno4C_FPKM_gene_guided N/A
Illumina_Oo_2C_FPKM_gene_guided N/A
SOLiD_SC_Oo_REPLICA_FPKM_gene_guided N/A
NIA60mer N/A
MOE430 N/A
Agilent44K N/A
Proteome N/A