DBTMEE
Database of Transcriptome in Mouse Early Embryos


Gene Search:

DBTMEE:2014788
GeneNup98
SynonymsNup96
Descriptionnucleoporin 98
LocusNM_001287164 UCSC: chr7:109267914-109358680(-) OLP: chr7:109267914-109358680(-)
NM_022979 UCSC: chr7:109282700-109358680(-) OLP: chr7:109282700-109358680(-)
NM_001287165 UCSC: chr7:109282700-109358680(-) OLP: chr7:109282700-109358680(-)
NM_001287167 UCSC: chr7:109293060-109358381(-) OLP: chr7:109293060-109358381(-)
NM_001287166 UCSC: chr7:109293060-109358680(-) OLP: chr7:109293060-109358680(-)
DB links


Entrez 269966
MGI 109404
Ensembl ENSMUSG00000063550
Featureprotein-coding
GO_BP
GO_MF
GO_CC
KEGG
Ver2_FPKM
Log10 (FPKM+1)
1.873
SPR
2.135
Oo
2.275
1C
2.089
2C
1.892
4C
1.082
ESC
1.406
MEF
2.204
p1C
1.829
p4C
1.077
iPSC
DBTMEEGeneRefSeqEntrezSPR_FPKMOo_FPKM1C_FPKM2C_FPKM4C_FPKMESC_FPKMMEF_FPKMp1C_FPKMp4C_FPKMiPSC_FPKM
2014788
(v2.0)		Nup98NM_001287164,NM_001287165,NM_001287166,NM_001287167,NM_022979269966
73.5824135.427187.281121.66577.000811.081924.4536158.90466.454710.9461
SPR_Histone_Erkek_5KaroundTSS
Enrichment of Histone Variant and Modification (+/- 5Kb from TSS)
0.608
H3.3
Rep.1
0.809
H3.3
Rep.2
4.737
H3K4me3
Rep.1
4.311
H3K4me3
Rep.2
-1.214
H3K27me3
Rep.1
-1.753
H3K27me3
Rep.2
DBTMEEGeneEntrezH3.3_1_ChIP/InputH3.3_1(Enrich; log2)H3.3_2_ChIP/InputH3.3_2(Enrich; log2)H3K4me3_1_ChIP/InputH3K4me3_1(Enrich; log2)H3K4me3_2_ChIP/InputH3K4me3_2(Enrich; log2)H3K27me3_1_ChIP/InputH3K27me3_1(Enrich; log2)H3K27me3_2_ChIP/InputH3K27me3_2(Enrich; log2)
2014788
(v2.0)		Nup98269966
664/3050.6079580/3050.809696/3054.73712424/3054.310531/305-1.2144136/305-1.7533
SPR_Histone_Erkek_2KaroundTSS
Enrichment of Histone Variant and Modification (+/- 2Kb from TSS)
0.77
H3.3
Rep.1
0.805
H3.3
Rep.2
5.531
H3K4me3
Rep.1
4.945
H3K4me3
Rep.2
-1.592
H3K27me3
Rep.1
-2.207
H3K27me3
Rep.2
DBTMEEGeneEntrezH3.3_1_ChIP/InputH3.3_1(Enrich; log2)H3.3_2_ChIP/InputH3.3_2(Enrich; log2)H3K4me3_1_ChIP/InputH3K4me3_1(Enrich; log2)H3K4me3_2_ChIP/InputH3K4me3_2(Enrich; log2)H3K27me3_1_ChIP/InputH3K27me3_1(Enrich; log2)H3K27me3_2_ChIP/InputH3K27me3_2(Enrich; log2)
2014788
(v2.0)		Nup98269966
388/1590.7705302/1590.8054651/1595.53081976/1594.944812/159-1.591951/159-2.2066
SPR_Methy_Kobayashi_5KaroundTSS
DBTMEEGeneEntrezTotal_mC_levelsNumber_of_mCsAveraged_Methylation_level
2014788
(v2.0)		Nup98269966
21.94165837.83
SPR_Methy_Kobayashi_2KaroundTSS
DBTMEEGeneEntrezTotal_mC_levelsNumber_of_mCsAveraged_Methylation_level
2014788
(v2.0)		Nup98269966
6.44344215.34
SOLiD_OocyteTo4C_FPKM_gene_guided N/A
SOLiD_Illumina_Oo_1C_Sperm_FPKM_gene_guided N/A
SOLiD_Partheno1C_FPKM_gene_guided N/A
SOLiD_Illumina_Oo_p1C_Sperm_FPKM_gene_guided N/A
SOLiD_Partheno4C_FPKM_gene_guided N/A
Illumina_Oo_2C_FPKM_gene_guided N/A
SOLiD_SC_Oo_REPLICA_FPKM_gene_guided N/A
NIA60mer N/A
MOE430 N/A
Agilent44K N/A
Proteome N/A