DBTMEE
Database of Transcriptome in Mouse Early Embryos


Gene Search:

DBTMEE:2016553
GenePeo1
SynonymsD19Ertd626e
twinkle
Twinl
Descriptionprogressive external ophthalmoplegia 1 (human)
LocusNM_153796 UCSC: chr19:45081048-45087252(+) OLP: chr19:45081048-45087252(+)
DB links


Entrez 226153
MGI 2137410
Ensembl ENSMUSG00000025209
Featureprotein-coding
GO_BP
GO_MF
GO_CC
KEGG
Ver2_FPKM
Log10 (FPKM+1)
0.527
SPR
1.118
Oo
1.005
1C
1.385
2C
1.067
4C
0.901
ESC
1.153
MEF
1.091
p1C
1.142
p4C
0.912
iPSC
DBTMEEGeneRefSeqEntrezSPR_FPKMOo_FPKM1C_FPKM2C_FPKM4C_FPKMESC_FPKMMEF_FPKMp1C_FPKMp4C_FPKMiPSC_FPKM
2016553
(v2.0)		Peo1NM_153796226153
2.3679312.11229.1132223.293610.67586.9691213.22211.327612.8837.15758
SPR_Histone_Erkek_5KaroundTSS
Enrichment of Histone Variant and Modification (+/- 5Kb from TSS)
0.049
H3.3
Rep.1
-0.549
H3.3
Rep.2
2.458
H3K4me3
Rep.1
1.393
H3K4me3
Rep.2
-2.482
H3K27me3
Rep.1
-2.191
H3K27me3
Rep.2
DBTMEEGeneEntrezH3.3_1_ChIP/InputH3.3_1(Enrich; log2)H3.3_2_ChIP/InputH3.3_2(Enrich; log2)H3K4me3_1_ChIP/InputH3K4me3_1(Enrich; log2)H3K4me3_2_ChIP/InputH3K4me3_2(Enrich; log2)H3K27me3_1_ChIP/InputH3K27me3_1(Enrich; log2)H3K27me3_2_ChIP/InputH3K27me3_2(Enrich; log2)
2016553
(v2.0)		Peo1226153
784/5310.0492393/531-0.5491245/5312.4584556/5311.393422/531-2.4825175/531-2.191
SPR_Histone_Erkek_2KaroundTSS
Enrichment of Histone Variant and Modification (+/- 2Kb from TSS)
0.308
H3.3
Rep.1
-0.429
H3.3
Rep.2
3.492
H3K4me3
Rep.1
2.433
H3K4me3
Rep.2
-3.454
H3K27me3
Rep.1
-2.379
H3K27me3
Rep.2
DBTMEEGeneEntrezH3.3_1_ChIP/InputH3.3_1(Enrich; log2)H3.3_2_ChIP/InputH3.3_2(Enrich; log2)H3K4me3_1_ChIP/InputH3K4me3_1(Enrich; log2)H3K4me3_2_ChIP/InputH3K4me3_2(Enrich; log2)H3K27me3_1_ChIP/InputH3K27me3_1(Enrich; log2)H3K27me3_2_ChIP/InputH3K27me3_2(Enrich; log2)
2016553
(v2.0)		Peo1226153
396/2240.3079180/224-0.4295218/2243.4924485/2242.43264/224-3.454264/224-2.3794
SPR_Methy_Kobayashi_5KaroundTSS
DBTMEEGeneEntrezTotal_mC_levelsNumber_of_mCsAveraged_Methylation_level
2016553
(v2.0)		Peo1226153
118.94420757.46
SPR_Methy_Kobayashi_2KaroundTSS
DBTMEEGeneEntrezTotal_mC_levelsNumber_of_mCsAveraged_Methylation_level
2016553
(v2.0)		Peo1226153
45.03613034.64
SOLiD_OocyteTo4C_FPKM_gene_guided N/A
SOLiD_Illumina_Oo_1C_Sperm_FPKM_gene_guided N/A
SOLiD_Partheno1C_FPKM_gene_guided N/A
SOLiD_Illumina_Oo_p1C_Sperm_FPKM_gene_guided N/A
SOLiD_Partheno4C_FPKM_gene_guided N/A
Illumina_Oo_2C_FPKM_gene_guided N/A
SOLiD_SC_Oo_REPLICA_FPKM_gene_guided N/A
NIA60mer N/A
MOE430 N/A
Agilent44K N/A
Proteome N/A