DBTMEE
Database of Transcriptome in Mouse Early Embryos


Gene Search:

DBTMEE:2016667
GenePhgdh
Synonyms3-PGDH
3PGDH
A10
PGAD
PGD
PGDH
SERA
Description3-phosphoglycerate dehydrogenase
LocusNM_016966 UCSC: chr3:98117094-98143892(-) OLP: chr3:98117094-98143892(-)
DB links


Entrez 236539
MGI 1355330
Ensembl ENSMUSG00000053398
Vega OTTMUSG00000026317
Featureprotein-coding
GO_BP
GO_MF
  •   4 Terms
      phosphoglycerate dehydrogenase activity (GO:0004617)
      oxidoreductase activity (GO:0016491)
      oxidoreductase activity, acting on the CH-OH group of donors, NAD or NADP as acceptor (GO:0016616)
      NAD binding (GO:0051287)
GO_CC
  •   1 Terms
KEGG
Ver2_FPKM
DBTMEEGeneRefSeqEntrezSPR_FPKMOo_FPKM1C_FPKM2C_FPKM4C_FPKMESC_FPKMMEF_FPKMp1C_FPKMp4C_FPKMiPSC_FPKM
2016667
(v2.0)		PhgdhNM_016966236539
23.852412.01316.3759392.6777183.27482.5311118.2996.07359143.15787.5862
SPR_Histone_Erkek_5KaroundTSS
DBTMEEGeneEntrezH3.3_1_ChIP/InputH3.3_1(Enrich; log2)H3.3_2_ChIP/InputH3.3_2(Enrich; log2)H3K4me3_1_ChIP/InputH3K4me3_1(Enrich; log2)H3K4me3_2_ChIP/InputH3K4me3_2(Enrich; log2)H3K27me3_1_ChIP/InputH3K27me3_1(Enrich; log2)H3K27me3_2_ChIP/InputH3K27me3_2(Enrich; log2)
2016667
(v2.0)		Phgdh236539
699/4410.1514418/441-0.19369/4410.9066327/4410.896191/4410.84461019/4410.6078
SPR_Histone_Erkek_2KaroundTSS
DBTMEEGeneEntrezH3.3_1_ChIP/InputH3.3_1(Enrich; log2)H3.3_2_ChIP/InputH3.3_2(Enrich; log2)H3K4me3_1_ChIP/InputH3K4me3_1(Enrich; log2)H3K4me3_2_ChIP/InputH3K4me3_2(Enrich; log2)H3K27me3_1_ChIP/InputH3K27me3_1(Enrich; log2)H3K27me3_2_ChIP/InputH3K27me3_2(Enrich; log2)
2016667
(v2.0)		Phgdh236539
341/1760.4392212/1760.151554/1761.8268253/1761.8401132/1761.6199619/1761.2104
SPR_Methy_Kobayashi_5KaroundTSS
DBTMEEGeneEntrezTotal_mC_levelsNumber_of_mCsAveraged_Methylation_level
2016667
(v2.0)		Phgdh236539
85.183815156.41
SPR_Methy_Kobayashi_2KaroundTSS
DBTMEEGeneEntrezTotal_mC_levelsNumber_of_mCsAveraged_Methylation_level
2016667
(v2.0)		Phgdh236539
24.86798728.58
SOLiD_OocyteTo4C_FPKM_gene_guided N/A
SOLiD_Illumina_Oo_1C_Sperm_FPKM_gene_guided N/A
SOLiD_Partheno1C_FPKM_gene_guided N/A
SOLiD_Illumina_Oo_p1C_Sperm_FPKM_gene_guided N/A
SOLiD_Partheno4C_FPKM_gene_guided N/A
Illumina_Oo_2C_FPKM_gene_guided N/A
SOLiD_SC_Oo_REPLICA_FPKM_gene_guided N/A
NIA60mer N/A
MOE430 N/A
Agilent44K N/A
Proteome N/A