DBTMEE
Database of Transcriptome in Mouse Early Embryos


Gene Search:

DBTMEE:2017240
GenePpp1r8
SynonymsNIPP1
Descriptionprotein phosphatase 1, regulatory (inhibitor) subunit 8
LocusNM_146154 UCSC: chr4:132382839-132399084(-) OLP: chr4:132382839-132399084(-)
NM_001290725 UCSC: chr4:132382839-132399084(-) OLP: chr4:132382839-132399084(-)
DB links


Entrez 100336
MGI 2140494
Ensembl ENSMUSG00000028882
Vega OTTMUSG00000009995
Featureprotein-coding
GO_BP
GO_MF
GO_CC
KEGG
Ver2_FPKM
Log10 (FPKM+1)
1.015
SPR
0.711
Oo
1.191
1C
2.039
2C
1.899
4C
1.627
ESC
1.486
MEF
1.08
p1C
1.878
p4C
1.695
iPSC
DBTMEEGeneRefSeqEntrezSPR_FPKMOo_FPKM1C_FPKM2C_FPKM4C_FPKMESC_FPKMMEF_FPKMp1C_FPKMp4C_FPKMiPSC_FPKM
2017240
(v2.0)		Ppp1r8NM_001290725,NM_146154100336
9.341324.141614.5383108.38878.229841.402729.65311.035574.515548.5239
SPR_Histone_Erkek_5KaroundTSS
Enrichment of Histone Variant and Modification (+/- 5Kb from TSS)
0.273
H3.3
Rep.1
0.041
H3.3
Rep.2
1.655
H3K4me3
Rep.1
0.908
H3K4me3
Rep.2
-2.831
H3K27me3
Rep.1
-2.002
H3K27me3
Rep.2
DBTMEEGeneEntrezH3.3_1_ChIP/InputH3.3_1(Enrich; log2)H3.3_2_ChIP/InputH3.3_2(Enrich; log2)H3K4me3_1_ChIP/InputH3K4me3_1(Enrich; log2)H3K4me3_2_ChIP/InputH3K4me3_2(Enrich; log2)H3K27me3_1_ChIP/InputH3K27me3_1(Enrich; log2)H3K27me3_2_ChIP/InputH3K27me3_2(Enrich; log2)
2017240
(v2.0)		Ppp1r8100336
657/3810.2726425/3810.0414101/3811.6546285/3810.90812/381-2.8311143/381-2.0017
SPR_Histone_Erkek_2KaroundTSS
Enrichment of Histone Variant and Modification (+/- 2Kb from TSS)
0.489
H3.3
Rep.1
0.008
H3.3
Rep.2
2.777
H3K4me3
Rep.1
2.078
H3K4me3
Rep.2
-3.681
H3K27me3
Rep.1
-2.207
H3K27me3
Rep.2
DBTMEEGeneEntrezH3.3_1_ChIP/InputH3.3_1(Enrich; log2)H3.3_2_ChIP/InputH3.3_2(Enrich; log2)H3K4me3_1_ChIP/InputH3K4me3_1(Enrich; log2)H3K4me3_2_ChIP/InputH3K4me3_2(Enrich; log2)H3K27me3_1_ChIP/InputH3K27me3_1(Enrich; log2)H3K27me3_2_ChIP/InputH3K27me3_2(Enrich; log2)
2017240
(v2.0)		Ppp1r8100336
313/1560.4891170/1560.007794/1562.7775265/1562.07812/156-3.680750/156-2.2071
SPR_Methy_Kobayashi_5KaroundTSS
DBTMEEGeneEntrezTotal_mC_levelsNumber_of_mCsAveraged_Methylation_level
2017240
(v2.0)		Ppp1r8100336
60.39611652.07
SPR_Methy_Kobayashi_2KaroundTSS
DBTMEEGeneEntrezTotal_mC_levelsNumber_of_mCsAveraged_Methylation_level
2017240
(v2.0)		Ppp1r8100336
18.74547226.04
SOLiD_OocyteTo4C_FPKM_gene_guided N/A
SOLiD_Illumina_Oo_1C_Sperm_FPKM_gene_guided N/A
SOLiD_Partheno1C_FPKM_gene_guided N/A
SOLiD_Illumina_Oo_p1C_Sperm_FPKM_gene_guided N/A
SOLiD_Partheno4C_FPKM_gene_guided N/A
Illumina_Oo_2C_FPKM_gene_guided N/A
SOLiD_SC_Oo_REPLICA_FPKM_gene_guided N/A
NIA60mer N/A
MOE430 N/A
Agilent44K N/A
Proteome N/A