DBTMEE
Database of Transcriptome in Mouse Early Embryos


Gene Search:

DBTMEE:2017272
GenePpp6c
Synonyms
Descriptionprotein phosphatase 6, catalytic subunit
LocusNM_024209 UCSC: chr2:39052318-39081858(-) OLP: chr2:39052318-39081858(-)
DB links


Entrez 67857
MGI 1915107
Featureprotein-coding
GO_BP
GO_MF
GO_CC
KEGG
Ver2_FPKM
Log10 (FPKM+1)
1.305
SPR
1.044
Oo
1.291
1C
1.576
2C
1.873
4C
1.406
ESC
1.251
MEF
1.141
p1C
1.77
p4C
1.403
iPSC
DBTMEEGeneRefSeqEntrezSPR_FPKMOo_FPKM1C_FPKM2C_FPKM4C_FPKMESC_FPKMMEF_FPKMp1C_FPKMp4C_FPKMiPSC_FPKM
2017272
(v2.0)		Ppp6cNM_02420967857
19.205810.05518.525236.672973.654424.483516.810412.841457.886824.2811
SPR_Histone_Erkek_5KaroundTSS
Enrichment of Histone Variant and Modification (+/- 5Kb from TSS)
0.042
H3.3
Rep.1
0.176
H3.3
Rep.2
1.242
H3K4me3
Rep.1
0.891
H3K4me3
Rep.2
-0.033
H3K27me3
Rep.1
-0.268
H3K27me3
Rep.2
DBTMEEGeneEntrezH3.3_1_ChIP/InputH3.3_1(Enrich; log2)H3.3_2_ChIP/InputH3.3_2(Enrich; log2)H3K4me3_1_ChIP/InputH3K4me3_1(Enrich; log2)H3K4me3_2_ChIP/InputH3K4me3_2(Enrich; log2)H3K27me3_1_ChIP/InputH3K27me3_1(Enrich; log2)H3K27me3_2_ChIP/InputH3K27me3_2(Enrich; log2)
2017272
(v2.0)		Ppp6c67857
457/3110.0423381/3110.176162/3111.2424230/3110.890673/311-0.0327391/311-0.2681
SPR_Histone_Erkek_2KaroundTSS
Enrichment of Histone Variant and Modification (+/- 2Kb from TSS)
0.294
H3.3
Rep.1
0.388
H3.3
Rep.2
2.352
H3K4me3
Rep.1
2.076
H3K4me3
Rep.2
-0.386
H3K27me3
Rep.1
-0.768
H3K27me3
Rep.2
DBTMEEGeneEntrezH3.3_1_ChIP/InputH3.3_1(Enrich; log2)H3.3_2_ChIP/InputH3.3_2(Enrich; log2)H3K4me3_1_ChIP/InputH3K4me3_1(Enrich; log2)H3K4me3_2_ChIP/InputH3K4me3_2(Enrich; log2)H3K27me3_1_ChIP/InputH3K27me3_1(Enrich; log2)H3K27me3_2_ChIP/InputH3K27me3_2(Enrich; log2)
2017272
(v2.0)		Ppp6c67857
212/1210.294172/1210.388455/1212.3517206/1212.076222/121-0.3863107/121-0.7683
SPR_Methy_Kobayashi_5KaroundTSS
DBTMEEGeneEntrezTotal_mC_levelsNumber_of_mCsAveraged_Methylation_level
2017272
(v2.0)		Ppp6c67857
25.38238928.52
SPR_Methy_Kobayashi_2KaroundTSS
DBTMEEGeneEntrezTotal_mC_levelsNumber_of_mCsAveraged_Methylation_level
2017272
(v2.0)		Ppp6c67857
6.97545512.68
SOLiD_OocyteTo4C_FPKM_gene_guided N/A
SOLiD_Illumina_Oo_1C_Sperm_FPKM_gene_guided N/A
SOLiD_Partheno1C_FPKM_gene_guided N/A
SOLiD_Illumina_Oo_p1C_Sperm_FPKM_gene_guided N/A
SOLiD_Partheno4C_FPKM_gene_guided N/A
Illumina_Oo_2C_FPKM_gene_guided N/A
SOLiD_SC_Oo_REPLICA_FPKM_gene_guided N/A
NIA60mer N/A
MOE430 N/A
Agilent44K N/A
Proteome N/A