DBTMEE
Database of Transcriptome in Mouse Early Embryos


Gene Search:

DBTMEE:2018119
GeneRchy1
SynonymsPirh2
PRO1996
Zfp363
Descriptionring finger and CHY zinc finger domain containing 1
LocusNM_001271797 UCSC: chr5:92377868-92392094(-) OLP: chr5:92377868-92392094(-)
NM_026557 UCSC: chr5:92377868-92392094(-) OLP: chr5:92377868-92392094(-)
NR_073442 UCSC: chr5:92377868-92391582(-) OLP: chr5:92377868-92391582(-)
DB links


Entrez 68098
MGI 1915348
Ensembl ENSMUSG00000029397
Vega OTTMUSG00000020371
Featureprotein-coding
GO_BP
  •   5 Terms
      protein ubiquitination (GO:0016567)
      positive regulation of protein ubiquitination (GO:0031398)
      positive regulation of proteasomal ubiquitin-dependent protein catabolic process (GO:0032436)
      protein ubiquitination involved in ubiquitin-dependent protein catabolic process (GO:0042787)
      protein autoubiquitination (GO:0051865)
GO_MF
GO_CC
KEGG
Ver2_FPKM
Log10 (FPKM+1)
1.221
SPR
2.11
Oo
2.475
1C
1.894
2C
1.637
4C
1.151
ESC
1.39
MEF
2.375
p1C
1.615
p4C
1.216
iPSC
DBTMEEGeneRefSeqEntrezSPR_FPKMOo_FPKM1C_FPKM2C_FPKM4C_FPKMESC_FPKMMEF_FPKMp1C_FPKMp4C_FPKMiPSC_FPKM
2018119
(v2.0)		Rchy1NM_001271797,NM_026557,NR_07344268098
15.6201127.827297.44477.36842.359913.167723.5696236.34340.247215.4614
SPR_Histone_Erkek_5KaroundTSS
Enrichment of Histone Variant and Modification (+/- 5Kb from TSS)
0.165
H3.3
Rep.1
0.332
H3.3
Rep.2
4.369
H3K4me3
Rep.1
3.489
H3K4me3
Rep.2
-3.05
H3K27me3
Rep.1
-2.019
H3K27me3
Rep.2
DBTMEEGeneEntrezH3.3_1_ChIP/InputH3.3_1(Enrich; log2)H3.3_2_ChIP/InputH3.3_2(Enrich; log2)H3K4me3_1_ChIP/InputH3K4me3_1(Enrich; log2)H3K4me3_2_ChIP/InputH3K4me3_2(Enrich; log2)H3K27me3_1_ChIP/InputH3K27me3_1(Enrich; log2)H3K27me3_2_ChIP/InputH3K27me3_2(Enrich; log2)
2018119
(v2.0)		Rchy168098
600/3750.1648512/3750.3323658/3754.36851684/3753.489410/375-3.0495139/375-2.0194
SPR_Histone_Erkek_2KaroundTSS
Enrichment of Histone Variant and Modification (+/- 2Kb from TSS)
0.361
H3.3
Rep.1
0.536
H3.3
Rep.2
5.354
H3K4me3
Rep.1
4.432
H3K4me3
Rep.2
-3.435
H3K27me3
Rep.1
-2.011
H3K27me3
Rep.2
DBTMEEGeneEntrezH3.3_1_ChIP/InputH3.3_1(Enrich; log2)H3.3_2_ChIP/InputH3.3_2(Enrich; log2)H3K4me3_1_ChIP/InputH3K4me3_1(Enrich; log2)H3K4me3_2_ChIP/InputH3K4me3_2(Enrich; log2)H3K27me3_1_ChIP/InputH3K27me3_1(Enrich; log2)H3K27me3_2_ChIP/InputH3K27me3_2(Enrich; log2)
2018119
(v2.0)		Rchy168098
323/1760.3613277/1760.5356633/1765.35381530/1764.43163/176-3.435465/176-2.0113
SPR_Methy_Kobayashi_5KaroundTSS
DBTMEEGeneEntrezTotal_mC_levelsNumber_of_mCsAveraged_Methylation_level
2018119
(v2.0)		Rchy168098
49.2889949.79
SPR_Methy_Kobayashi_2KaroundTSS
DBTMEEGeneEntrezTotal_mC_levelsNumber_of_mCsAveraged_Methylation_level
2018119
(v2.0)		Rchy168098
10.17865817.55
SOLiD_OocyteTo4C_FPKM_gene_guided N/A
SOLiD_Illumina_Oo_1C_Sperm_FPKM_gene_guided N/A
SOLiD_Partheno1C_FPKM_gene_guided N/A
SOLiD_Illumina_Oo_p1C_Sperm_FPKM_gene_guided N/A
SOLiD_Partheno4C_FPKM_gene_guided N/A
Illumina_Oo_2C_FPKM_gene_guided N/A
SOLiD_SC_Oo_REPLICA_FPKM_gene_guided N/A
NIA60mer N/A
MOE430 N/A
Agilent44K N/A
Proteome N/A