DBTMEE
Database of Transcriptome in Mouse Early Embryos


Gene Search:

DBTMEE:2018407
GeneRnf111
SynonymsArkadia
Descriptionring finger 111
LocusNM_033604 UCSC: chr9:70273236-70351532(-) OLP: chr9:70273236-70351532(-)
DB links


Entrez 93836
MGI 1934919
Ensembl ENSMUSG00000032217
Featureprotein-coding
GO_BP
  •   8 Terms
      protein polyubiquitination (GO:0000209)
      multicellular organismal development (GO:0007275)
      pattern specification process (GO:0007389)
      protein ubiquitination (GO:0016567)
      positive regulation of transforming growth factor beta receptor signaling pathway (GO:0030511)
      ubiquitin-dependent SMAD protein catabolic process (GO:0030579)
      positive regulation of protein ubiquitination (GO:0031398)
      positive regulation of transcription, DNA-templated (GO:0045893)
GO_MF
GO_CC
KEGG
Ver2_FPKM
DBTMEEGeneRefSeqEntrezSPR_FPKMOo_FPKM1C_FPKM2C_FPKM4C_FPKMESC_FPKMMEF_FPKMp1C_FPKMp4C_FPKMiPSC_FPKM
2018407
(v2.0)		Rnf111NM_03360493836
7.6977838.725688.593681.358745.9576.673949.2427592.558537.85385.95786
SPR_Histone_Erkek_5KaroundTSS
DBTMEEGeneEntrezH3.3_1_ChIP/InputH3.3_1(Enrich; log2)H3.3_2_ChIP/InputH3.3_2(Enrich; log2)H3K4me3_1_ChIP/InputH3K4me3_1(Enrich; log2)H3K4me3_2_ChIP/InputH3K4me3_2(Enrich; log2)H3K27me3_1_ChIP/InputH3K27me3_1(Enrich; log2)H3K27me3_2_ChIP/InputH3K27me3_2(Enrich; log2)
2018407
(v2.0)		Rnf11193836
612/3650.2322432/3650.1266111/3651.8495334/3651.197628/365-1.6123186/365-1.5642
SPR_Histone_Erkek_2KaroundTSS
DBTMEEGeneEntrezH3.3_1_ChIP/InputH3.3_1(Enrich; log2)H3.3_2_ChIP/InputH3.3_2(Enrich; log2)H3K4me3_1_ChIP/InputH3K4me3_1(Enrich; log2)H3K4me3_2_ChIP/InputH3K4me3_2(Enrich; log2)H3K27me3_1_ChIP/InputH3K27me3_1(Enrich; log2)H3K27me3_2_ChIP/InputH3K27me3_2(Enrich; log2)
2018407
(v2.0)		Rnf11193836
341/1330.8407211/1330.5462103/1333.1203308/1332.52042/133-3.45740/133-2.2899
SPR_Methy_Kobayashi_5KaroundTSS
DBTMEEGeneEntrezTotal_mC_levelsNumber_of_mCsAveraged_Methylation_level
2018407
(v2.0)		Rnf11193836
37.675310336.58
SPR_Methy_Kobayashi_2KaroundTSS
DBTMEEGeneEntrezTotal_mC_levelsNumber_of_mCsAveraged_Methylation_level
2018407
(v2.0)		Rnf11193836
4.3367666.57
SOLiD_OocyteTo4C_FPKM_gene_guided N/A
SOLiD_Illumina_Oo_1C_Sperm_FPKM_gene_guided N/A
SOLiD_Partheno1C_FPKM_gene_guided N/A
SOLiD_Illumina_Oo_p1C_Sperm_FPKM_gene_guided N/A
SOLiD_Partheno4C_FPKM_gene_guided N/A
Illumina_Oo_2C_FPKM_gene_guided N/A
SOLiD_SC_Oo_REPLICA_FPKM_gene_guided N/A
NIA60mer N/A
MOE430 N/A
Agilent44K N/A
Proteome N/A