DBTMEE
Database of Transcriptome in Mouse Early Embryos


Gene Search:

DBTMEE:2018481
GeneRnf6
Synonyms
Descriptionring finger protein (C3H2C3 type) 6
LocusNM_001256087 UCSC: chr5:147020770-147032477(-) OLP: chr5:147020770-147032477(-)
NM_001256086 UCSC: chr5:147020770-147032547(-) OLP: chr5:147020770-147032547(-)
NM_001256085 UCSC: chr5:147020770-147032547(-) OLP: chr5:147020770-147032547(-)
NM_028774 UCSC: chr5:147020770-147033033(-) OLP: chr5:147020770-147033033(-)
DB links


Entrez 74132
MGI 1921382
Ensembl ENSMUSG00000029634
Vega OTTMUSG00000031090
Featureprotein-coding
GO_BP
  •   9 Terms
      regulation of transcription, DNA-templated (GO:0006355)
      ubiquitin-dependent protein catabolic process (GO:0006511)
      protein ubiquitination (GO:0016567)
      negative regulation of axon extension (GO:0030517)
      protein K27-linked ubiquitination (GO:0044314)
      positive regulation of transcription, DNA-templated (GO:0045893)
      regulation of androgen receptor signaling pathway (GO:0060765)
      protein K48-linked ubiquitination (GO:0070936)
      protein K6-linked ubiquitination (GO:0085020)
GO_MF
GO_CC
KEGG
Ver2_FPKM
DBTMEEGeneRefSeqEntrezSPR_FPKMOo_FPKM1C_FPKM2C_FPKM4C_FPKMESC_FPKMMEF_FPKMp1C_FPKMp4C_FPKMiPSC_FPKM
2018481
(v2.0)		Rnf6NM_001256085,NM_001256086,NM_001256087,NM_02877474132
13.646611.648812.6995166.48474.221711.749455.60118.8572263.483710.4616
SPR_Histone_Erkek_5KaroundTSS
DBTMEEGeneEntrezH3.3_1_ChIP/InputH3.3_1(Enrich; log2)H3.3_2_ChIP/InputH3.3_2(Enrich; log2)H3K4me3_1_ChIP/InputH3K4me3_1(Enrich; log2)H3K4me3_2_ChIP/InputH3K4me3_2(Enrich; log2)H3K27me3_1_ChIP/InputH3K27me3_1(Enrich; log2)H3K27me3_2_ChIP/InputH3K27me3_2(Enrich; log2)
2018481
(v2.0)		Rnf674132
562/3500.1699389/3500.036195/3501.6856257/3500.88121/350-1.9511117/350-2.1658
SPR_Histone_Erkek_2KaroundTSS
DBTMEEGeneEntrezH3.3_1_ChIP/InputH3.3_1(Enrich; log2)H3.3_2_ChIP/InputH3.3_2(Enrich; log2)H3K4me3_1_ChIP/InputH3K4me3_1(Enrich; log2)H3K4me3_2_ChIP/InputH3K4me3_2(Enrich; log2)H3K27me3_1_ChIP/InputH3K27me3_1(Enrich; log2)H3K27me3_2_ChIP/InputH3K27me3_2(Enrich; log2)
2018481
(v2.0)		Rnf674132
281/1590.307173/1590.005591/1592.7056240/1591.90864/159-2.970525/159-3.1925
SPR_Methy_Kobayashi_5KaroundTSS
DBTMEEGeneEntrezTotal_mC_levelsNumber_of_mCsAveraged_Methylation_level
2018481
(v2.0)		Rnf674132
49.052411443.03
SPR_Methy_Kobayashi_2KaroundTSS
DBTMEEGeneEntrezTotal_mC_levelsNumber_of_mCsAveraged_Methylation_level
2018481
(v2.0)		Rnf674132
13.67987119.27
SOLiD_OocyteTo4C_FPKM_gene_guided N/A
SOLiD_Illumina_Oo_1C_Sperm_FPKM_gene_guided N/A
SOLiD_Partheno1C_FPKM_gene_guided N/A
SOLiD_Illumina_Oo_p1C_Sperm_FPKM_gene_guided N/A
SOLiD_Partheno4C_FPKM_gene_guided N/A
Illumina_Oo_2C_FPKM_gene_guided N/A
SOLiD_SC_Oo_REPLICA_FPKM_gene_guided N/A
NIA60mer N/A
MOE430 N/A
Agilent44K N/A
Proteome N/A