DBTMEE
Database of Transcriptome in Mouse Early Embryos


Gene Search:

DBTMEE:2018519
GeneRpa1
Synonyms70kDa
RF-A
RP-A
Rpa
Descriptionreplication protein A1
LocusNM_001164223 UCSC: chr11:75113761-75161885(-) OLP: chr11:75113761-75161885(-)
NM_026653 UCSC: chr11:75113761-75161885(-) OLP: chr11:75113761-75161885(-)
DB links


Entrez 68275
MGI 1915525
Ensembl ENSMUSG00000000751
Vega OTTMUSG00000006199
Featureprotein-coding
GO_BP
GO_MF
GO_CC
KEGG
Ver2_FPKM
DBTMEEGeneRefSeqEntrezSPR_FPKMOo_FPKM1C_FPKM2C_FPKM4C_FPKMESC_FPKMMEF_FPKMp1C_FPKMp4C_FPKMiPSC_FPKM
2018519
(v2.0)		Rpa1NM_001164223,NM_02665368275
17.873166.125354.06895.557847.6613974.764267.637355.80988.6061380.2721
SPR_Histone_Erkek_5KaroundTSS
DBTMEEGeneEntrezH3.3_1_ChIP/InputH3.3_1(Enrich; log2)H3.3_2_ChIP/InputH3.3_2(Enrich; log2)H3K4me3_1_ChIP/InputH3K4me3_1(Enrich; log2)H3K4me3_2_ChIP/InputH3K4me3_2(Enrich; log2)H3K27me3_1_ChIP/InputH3K27me3_1(Enrich; log2)H3K27me3_2_ChIP/InputH3K27me3_2(Enrich; log2)
2018519
(v2.0)		Rpa168275
561/3490.1715403/3490.0911116/3491.975257/3490.885114/349-2.4995120/349-2.1256
SPR_Histone_Erkek_2KaroundTSS
DBTMEEGeneEntrezH3.3_1_ChIP/InputH3.3_1(Enrich; log2)H3.3_2_ChIP/InputH3.3_2(Enrich; log2)H3K4me3_1_ChIP/InputH3K4me3_1(Enrich; log2)H3K4me3_2_ChIP/InputH3K4me3_2(Enrich; log2)H3K27me3_1_ChIP/InputH3K27me3_1(Enrich; log2)H3K27me3_2_ChIP/InputH3K27me3_2(Enrich; log2)
2018519
(v2.0)		Rpa168275
279/1560.324179/1560.0817113/1563.0405245/1561.96537/156-2.265641/156-2.4841
SPR_Methy_Kobayashi_5KaroundTSS
DBTMEEGeneEntrezTotal_mC_levelsNumber_of_mCsAveraged_Methylation_level
2018519
(v2.0)		Rpa168275
56.244811947.26
SPR_Methy_Kobayashi_2KaroundTSS
DBTMEEGeneEntrezTotal_mC_levelsNumber_of_mCsAveraged_Methylation_level
2018519
(v2.0)		Rpa168275
15.00087320.55
SOLiD_OocyteTo4C_FPKM_gene_guided N/A
SOLiD_Illumina_Oo_1C_Sperm_FPKM_gene_guided N/A
SOLiD_Partheno1C_FPKM_gene_guided N/A
SOLiD_Illumina_Oo_p1C_Sperm_FPKM_gene_guided N/A
SOLiD_Partheno4C_FPKM_gene_guided N/A
Illumina_Oo_2C_FPKM_gene_guided N/A
SOLiD_SC_Oo_REPLICA_FPKM_gene_guided N/A
NIA60mer
DBTMEEArray_Feature_NumberOligo_Parent_CloneUnigeneGeneEntrezU_ClusterNAP_ClusterGene_U/NAPTIGRSwissProtESTOo1C2C4C8CMorulaBlastocyst
0017992
(v1.0)		4919G0114G12-3Mm.180734Rpa168275
U033076NAP005831-001Rpa1;TC847049Q9D2C8U,F,24.08064.10933.23513.20092.96423.31183.3261
0017992
(v1.0)		8113H3060A04-3Mm.180734Rpa168275
U033076NAP056608-1Rpa1;TC847051Q9D2C8U,F,23.35323.19163.14333.20333.36473.23763.2909
MOE430 N/A
Agilent44K N/A
Proteome N/A