DBTMEE
Database of Transcriptome in Mouse Early Embryos


Gene Search:

DBTMEE:2018611
GeneRps11
Synonyms
Descriptionribosomal protein S11
LocusNM_013725 UCSC: chr7:52377758-52379759(-) OLP: chr7:52377758-52379759(-)
DB links


Entrez 27207
MGI 1351329
Ensembl ENSMUSG00000003429
Featureprotein-coding
GO_BP
GO_MF
GO_CC
KEGG
Ver2_FPKM
Log10 (FPKM+1)
3.087
SPR
2.231
Oo
1.382
1C
2.939
2C
3.285
4C
3.802
ESC
2.623
MEF
1.423
p1C
3.261
p4C
3.896
iPSC
DBTMEEGeneRefSeqEntrezSPR_FPKMOo_FPKM1C_FPKM2C_FPKM4C_FPKMESC_FPKMMEF_FPKMp1C_FPKMp4C_FPKMiPSC_FPKM
2018611
(v2.0)		Rps11NM_01372527207
1219.83169.0523.1116867.4281928.516337.29418.55925.47581823.047868.99
SPR_Histone_Erkek_5KaroundTSS
Enrichment of Histone Variant and Modification (+/- 5Kb from TSS)
0.108
H3.3
Rep.1
-0.556
H3.3
Rep.2
4.499
H3K4me3
Rep.1
3.609
H3K4me3
Rep.2
-3.589
H3K27me3
Rep.1
-2.626
H3K27me3
Rep.2
DBTMEEGeneEntrezH3.3_1_ChIP/InputH3.3_1(Enrich; log2)H3.3_2_ChIP/InputH3.3_2(Enrich; log2)H3K4me3_1_ChIP/InputH3K4me3_1(Enrich; log2)H3K4me3_2_ChIP/InputH3K4me3_2(Enrich; log2)H3K27me3_1_ChIP/InputH3K27me3_1(Enrich; log2)H3K27me3_2_ChIP/InputH3K27me3_2(Enrich; log2)
2018611
(v2.0)		Rps1127207
841/5470.1076403/547-0.55571041/5474.49922664/5473.609210/547-3.5891133/547-2.6258
SPR_Histone_Erkek_2KaroundTSS
Enrichment of Histone Variant and Modification (+/- 2Kb from TSS)
0.388
H3.3
Rep.1
-0.174
H3.3
Rep.2
5.354
H3K4me3
Rep.1
4.476
H3K4me3
Rep.2
-3.113
H3K27me3
Rep.1
-2.623
H3K27me3
Rep.2
DBTMEEGeneEntrezH3.3_1_ChIP/InputH3.3_1(Enrich; log2)H3.3_2_ChIP/InputH3.3_2(Enrich; log2)H3K4me3_1_ChIP/InputH3K4me3_1(Enrich; log2)H3K4me3_2_ChIP/InputH3K4me3_2(Enrich; log2)H3K27me3_1_ChIP/InputH3K27me3_1(Enrich; log2)H3K27me3_2_ChIP/InputH3K27me3_2(Enrich; log2)
2018611
(v2.0)		Rps1127207
329/1760.3878169/176-0.1737633/1765.35381578/1764.47624/176-3.113442/176-2.6235
SPR_Methy_Kobayashi_5KaroundTSS
DBTMEEGeneEntrezTotal_mC_levelsNumber_of_mCsAveraged_Methylation_level
2018611
(v2.0)		Rps1127207
80.896225132.23
SPR_Methy_Kobayashi_2KaroundTSS
DBTMEEGeneEntrezTotal_mC_levelsNumber_of_mCsAveraged_Methylation_level
2018611
(v2.0)		Rps1127207
36.942412928.64
SOLiD_OocyteTo4C_FPKM_gene_guided N/A
SOLiD_Illumina_Oo_1C_Sperm_FPKM_gene_guided N/A
SOLiD_Partheno1C_FPKM_gene_guided N/A
SOLiD_Illumina_Oo_p1C_Sperm_FPKM_gene_guided N/A
SOLiD_Partheno4C_FPKM_gene_guided N/A
Illumina_Oo_2C_FPKM_gene_guided N/A
SOLiD_SC_Oo_REPLICA_FPKM_gene_guided N/A
NIA60mer
DBTMEEArray_Feature_NumberOligo_Parent_CloneUnigeneGeneEntrezU_ClusterNAP_ClusterGene_U/NAPTIGRSwissProtESTOo1C2C4C8CMorulaBlastocyst
0018083
(v1.0)		5849H3010A10-3Mm.196538Rps1127207
U028515NAP100955-001Rps11;TC852365,TC852362Q9CW75U,F,23.75573.96424.5094.60494.49184.71524.6722
MOE430 N/A
Agilent44K N/A
Proteome N/A