| Gene | Sap30 |
| Synonyms | 30kDa |
| Description | sin3 associated polypeptide |
| Locus | NM_021788 UCSC: chr8:59961499-59966657(-) OLP: chr8:59961499-59966657(-)
|
| DB links |
Entrez 60406
MGI 1929129
Ensembl ENSMUSG00000031609
Vega OTTMUSG00000029898
|
| Feature | protein-coding |
| GO_BP |
-
 4 Terms
negative regulation of transcription from RNA polymerase II promoter (GO:0000122)
transcription, DNA-templated (GO:0006351)
regulation of transcription, DNA-templated (GO:0006355)
skeletal muscle cell differentiation (GO:0035914)
|
| GO_MF |
-
4 Terms
|
| GO_CC |
-
3 Terms
|
| KEGG | |
| Ver2_FPKM |
| DBTMEE | Gene | RefSeq | Entrez | SPR_FPKM | Oo_FPKM | 1C_FPKM | 2C_FPKM | 4C_FPKM | ESC_FPKM | MEF_FPKM | p1C_FPKM | p4C_FPKM | iPSC_FPKM |
|---|
2018834
(v2.0) | Sap30 | NM_021788 | 60406
| 9.46097 | 184.013 | 489.713 | 98.6228 | 18.4045 | 65.2212 | 6.77978 | 484.612 | 37.8481 | 64.9054 |
|
| SPR_Histone_Erkek_5KaroundTSS |
Enrichment of Histone Variant and Modification (+/- 5Kb from TSS)
| DBTMEE | Gene | Entrez | H3.3_1_ChIP/Input | H3.3_1(Enrich; log2) | H3.3_2_ChIP/Input | H3.3_2(Enrich; log2) | H3K4me3_1_ChIP/Input | H3K4me3_1(Enrich; log2) | H3K4me3_2_ChIP/Input | H3K4me3_2(Enrich; log2) | H3K27me3_1_ChIP/Input | H3K27me3_1(Enrich; log2) | H3K27me3_2_ChIP/Input | H3K27me3_2(Enrich; log2) |
|---|
2018834
(v2.0) | Sap30 | 60406
| 660/360 | 0.3608 | 428/360 | 0.1331 | 194/360 | 2.6687 | 456/360 | 1.6654 | 84/360 | -0.0413 | 443/360 | -0.2991 |
|
| SPR_Histone_Erkek_2KaroundTSS |
Enrichment of Histone Variant and Modification (+/- 2Kb from TSS)
| DBTMEE | Gene | Entrez | H3.3_1_ChIP/Input | H3.3_1(Enrich; log2) | H3.3_2_ChIP/Input | H3.3_2(Enrich; log2) | H3K4me3_1_ChIP/Input | H3K4me3_1(Enrich; log2) | H3K4me3_2_ChIP/Input | H3K4me3_2(Enrich; log2) | H3K27me3_1_ChIP/Input | H3K27me3_1(Enrich; log2) | H3K27me3_2_ChIP/Input | H3K27me3_2(Enrich; log2) |
|---|
2018834
(v2.0) | Sap30 | 60406
| 397/171 | 0.6991 | 205/171 | 0.1446 | 189/171 | 3.6542 | 431/171 | 2.6472 | 31/171 | -0.3948 | 192/171 | -0.4293 |
|
| SPR_Methy_Kobayashi_5KaroundTSS |
| DBTMEE | Gene | Entrez | Total_mC_levels | Number_of_mCs | Averaged_Methylation_level |
|---|
2018834
(v2.0) | Sap30 | 60406
| 39.9496 | 144 | 27.74 |
|
| SPR_Methy_Kobayashi_2KaroundTSS |
| DBTMEE | Gene | Entrez | Total_mC_levels | Number_of_mCs | Averaged_Methylation_level |
|---|
2018834
(v2.0) | Sap30 | 60406
| 11.9028 | 108 | 11.02 |
|
| SOLiD_OocyteTo4C_FPKM_gene_guided |
N/A |
| SOLiD_Illumina_Oo_1C_Sperm_FPKM_gene_guided |
N/A |
| SOLiD_Partheno1C_FPKM_gene_guided |
N/A |
| SOLiD_Illumina_Oo_p1C_Sperm_FPKM_gene_guided |
N/A |
| SOLiD_Partheno4C_FPKM_gene_guided |
N/A |
| Illumina_Oo_2C_FPKM_gene_guided |
N/A |
| SOLiD_SC_Oo_REPLICA_FPKM_gene_guided |
N/A |
| NIA60mer |
| DBTMEE | Array_Feature_Number | Oligo_Parent_Clone | Unigene | Gene | Entrez | U_Cluster | NAP_Cluster | Gene_U/NAP | TIGR | SwissProt | EST | Oo | 1C | 2C | 4C | 8C | Morula | Blastocyst |
|---|
0018301
(v1.0) | 5209 | AF075136.1 | Mm.118 | Sap30 | 60406
| U029840 | NAP010839-001 | | TC915206 | O88574 | | 4.7147 | 4.8849 | 3.9432 | 3.6934 | 3.1083 | 3.1796 | 2.8757 |
|
| MOE430 |
N/A |
| Agilent44K |
N/A |
| Proteome |
N/A |
