DBTMEE
Database of Transcriptome in Mouse Early Embryos


Gene Search:

DBTMEE:2018858
GeneSbds
SynonymsCGI-97
DescriptionShwachman-Bodian-Diamond syndrome homolog (human)
LocusNM_023248 UCSC: chr5:130721602-130731332(-) OLP: chr5:130721602-130731332(-)
DB links


Entrez 66711
MGI 1913961
Ensembl ENSMUSG00000025337
Vega OTTMUSG00000027908
Featureprotein-coding
GO_BP
GO_MF
GO_CC
KEGG
  •   1 Terms
      Ribosome biogenesis in eukaryotes (mmu03008)
Ver2_FPKM
Log10 (FPKM+1)
1.634
SPR
1.992
Oo
2.171
1C
1.736
2C
1.914
4C
1.646
ESC
1.383
MEF
2.232
p1C
1.921
p4C
1.739
iPSC
DBTMEEGeneRefSeqEntrezSPR_FPKMOo_FPKM1C_FPKM2C_FPKM4C_FPKMESC_FPKMMEF_FPKMp1C_FPKMp4C_FPKMiPSC_FPKM
2018858
(v2.0)		SbdsNM_02324866711
42.039197.2555147.3753.431180.942443.228323.1362169.44682.449453.8428
SPR_Histone_Erkek_5KaroundTSS
Enrichment of Histone Variant and Modification (+/- 5Kb from TSS)
-0.079
H3.3
Rep.1
-0.159
H3.3
Rep.2
2.865
H3K4me3
Rep.1
2.142
H3K4me3
Rep.2
-3.928
H3K27me3
Rep.1
-3.146
H3K27me3
Rep.2
DBTMEEGeneEntrezH3.3_1_ChIP/InputH3.3_1(Enrich; log2)H3.3_2_ChIP/InputH3.3_2(Enrich; log2)H3K4me3_1_ChIP/InputH3K4me3_1(Enrich; log2)H3K4me3_2_ChIP/InputH3K4me3_2(Enrich; log2)H3K27me3_1_ChIP/InputH3K27me3_1(Enrich; log2)H3K27me3_2_ChIP/InputH3K27me3_2(Enrich; log2)
2018858
(v2.0)		Sbds66711
508/376-0.0785365/376-0.1586232/3762.8648663/3762.14215/376-3.927763/376-3.1462
SPR_Histone_Erkek_2KaroundTSS
Enrichment of Histone Variant and Modification (+/- 2Kb from TSS)
-0.105
H3.3
Rep.1
-0.116
H3.3
Rep.2
3.861
H3K4me3
Rep.1
3.126
H3K4me3
Rep.2
-3.842
H3K27me3
Rep.1
-3.277
H3K27me3
Rep.2
DBTMEEGeneEntrezH3.3_1_ChIP/InputH3.3_1(Enrich; log2)H3.3_2_ChIP/InputH3.3_2(Enrich; log2)H3K4me3_1_ChIP/InputH3K4me3_1(Enrich; log2)H3K4me3_2_ChIP/InputH3K4me3_2(Enrich; log2)H3K27me3_1_ChIP/InputH3K27me3_1(Enrich; log2)H3K27me3_2_ChIP/InputH3K27me3_2(Enrich; log2)
2018858
(v2.0)		Sbds66711
232/175-0.1054175/175-0.1155223/1753.8605615/1753.12632/175-3.842426/175-3.2766
SPR_Methy_Kobayashi_5KaroundTSS
DBTMEEGeneEntrezTotal_mC_levelsNumber_of_mCsAveraged_Methylation_level
2018858
(v2.0)		Sbds66711
63.225116837.63
SPR_Methy_Kobayashi_2KaroundTSS
DBTMEEGeneEntrezTotal_mC_levelsNumber_of_mCsAveraged_Methylation_level
2018858
(v2.0)		Sbds66711
8.9854989.17
SOLiD_OocyteTo4C_FPKM_gene_guided N/A
SOLiD_Illumina_Oo_1C_Sperm_FPKM_gene_guided N/A
SOLiD_Partheno1C_FPKM_gene_guided N/A
SOLiD_Illumina_Oo_p1C_Sperm_FPKM_gene_guided N/A
SOLiD_Partheno4C_FPKM_gene_guided N/A
Illumina_Oo_2C_FPKM_gene_guided N/A
SOLiD_SC_Oo_REPLICA_FPKM_gene_guided N/A
NIA60mer N/A
MOE430 N/A
Agilent44K N/A
Proteome N/A