DBTMEE
Database of Transcriptome in Mouse Early Embryos


Gene Search:

DBTMEE:2019357
GeneSigmar1
SynonymsmSigmaR1
Oprs1
Descriptionsigma non-opioid intracellular receptor 1
LocusNM_001286542 UCSC: chr4:41685366-41688232(-) OLP: chr4:41685366-41688232(-)
NM_001286541 UCSC: chr4:41685366-41688232(-) OLP: chr4:41685366-41688232(-)
NM_001286540 UCSC: chr4:41685366-41688232(-) OLP: chr4:41685366-41688232(-)
NM_001286539 UCSC: chr4:41685366-41688232(-) OLP: chr4:41685366-41688232(-)
NM_001286538 UCSC: chr4:41685366-41688232(-) OLP: chr4:41685366-41688232(-)
NM_011014 UCSC: chr4:41685366-41688232(-) OLP: chr4:41685366-41688232(-)
NM_001286605 UCSC: chr4:41685366-41688232(-) OLP: chr4:41685366-41688232(-)
NM_001286551 UCSC: chr4:41685366-41688232(-) OLP: chr4:41685366-41688232(-)
DB links


Entrez 18391
MGI 1195268
Ensembl ENSMUSG00000036078
Vega OTTMUSG00000006675
Featureprotein-coding
GO_BP
GO_MF
GO_CC
KEGG
Ver2_FPKM
DBTMEEGeneRefSeqEntrezSPR_FPKMOo_FPKM1C_FPKM2C_FPKM4C_FPKMESC_FPKMMEF_FPKMp1C_FPKMp4C_FPKMiPSC_FPKM
2019357
(v2.0)		Sigmar1NM_001286538,NM_001286539,NM_001286540,NM_001286541,NM_001286542,NM_001286551,NM_001286605,NM_01101418391
28.977914.296714.8714.85419.5760722.478524.116116.6546.8509426.2648
SPR_Histone_Erkek_5KaroundTSS
DBTMEEGeneEntrezH3.3_1_ChIP/InputH3.3_1(Enrich; log2)H3.3_2_ChIP/InputH3.3_2(Enrich; log2)H3K4me3_1_ChIP/InputH3K4me3_1(Enrich; log2)H3K4me3_2_ChIP/InputH3K4me3_2(Enrich; log2)H3K27me3_1_ChIP/InputH3K27me3_1(Enrich; log2)H3K27me3_2_ChIP/InputH3K27me3_2(Enrich; log2)
2019357
(v2.0)		Sigmar118391
650/4390.0533384/439-0.308598/4391.413223/4390.3523101/439-0.0615644/439-0.0464
SPR_Histone_Erkek_2KaroundTSS
DBTMEEGeneEntrezH3.3_1_ChIP/InputH3.3_1(Enrich; log2)H3.3_2_ChIP/InputH3.3_2(Enrich; log2)H3K4me3_1_ChIP/InputH3K4me3_1(Enrich; log2)H3K4me3_2_ChIP/InputH3K4me3_2(Enrich; log2)H3K27me3_1_ChIP/InputH3K27me3_1(Enrich; log2)H3K27me3_2_ChIP/InputH3K27me3_2(Enrich; log2)
2019357
(v2.0)		Sigmar118391
333/2000.2217160/200-0.435687/2002.3317170/2001.087230/200-0.6616197/200-0.6173
SPR_Methy_Kobayashi_5KaroundTSS
DBTMEEGeneEntrezTotal_mC_levelsNumber_of_mCsAveraged_Methylation_level
2019357
(v2.0)		Sigmar118391
52.400811844.41
SPR_Methy_Kobayashi_2KaroundTSS
DBTMEEGeneEntrezTotal_mC_levelsNumber_of_mCsAveraged_Methylation_level
2019357
(v2.0)		Sigmar118391
19.02458322.92
SOLiD_OocyteTo4C_FPKM_gene_guided N/A
SOLiD_Illumina_Oo_1C_Sperm_FPKM_gene_guided N/A
SOLiD_Partheno1C_FPKM_gene_guided N/A
SOLiD_Illumina_Oo_p1C_Sperm_FPKM_gene_guided N/A
SOLiD_Partheno4C_FPKM_gene_guided N/A
Illumina_Oo_2C_FPKM_gene_guided N/A
SOLiD_SC_Oo_REPLICA_FPKM_gene_guided N/A
NIA60mer N/A
MOE430 N/A
Agilent44K N/A
Proteome N/A