DBTMEE
Database of Transcriptome in Mouse Early Embryos


Gene Search:

DBTMEE:2019854
GeneSmad2
SynonymsMadh2
Madr2
Smad 2
DescriptionSMAD family member 2
LocusNM_010754 UCSC: chr18:76401355-76471401(+) OLP: chr18:76401355-76471401(+)
NM_001252481 UCSC: chr18:76420775-76471401(+) OLP: chr18:76420775-76471401(+)
DB links


Entrez 17126
MGI 108051
Featureprotein-coding
GO_BP
GO_MF
GO_CC
KEGG
Ver2_FPKM
Log10 (FPKM+1)
0.723
SPR
1.307
Oo
1.42
1C
0.844
2C
0.95
4C
0.784
ESC
1.199
MEF
1.335
p1C
0.932
p4C
0.735
iPSC
DBTMEEGeneRefSeqEntrezSPR_FPKMOo_FPKM1C_FPKM2C_FPKM4C_FPKMESC_FPKMMEF_FPKMp1C_FPKMp4C_FPKMiPSC_FPKM
2019854
(v2.0)		Smad2NM_001252481,NM_01075417126
4.2814819.2725.32495.982867.910035.0761514.818620.64597.554644.4372
SPR_Histone_Erkek_5KaroundTSS
Enrichment of Histone Variant and Modification (+/- 5Kb from TSS)
0.419
H3.3
Rep.1
0.321
H3.3
Rep.2
1.765
H3K4me3
Rep.1
0.656
H3K4me3
Rep.2
-1.171
H3K27me3
Rep.1
-1.177
H3K27me3
Rep.2
DBTMEEGeneEntrezH3.3_1_ChIP/InputH3.3_1(Enrich; log2)H3.3_2_ChIP/InputH3.3_2(Enrich; log2)H3K4me3_1_ChIP/InputH3K4me3_1(Enrich; log2)H3K4me3_2_ChIP/InputH3K4me3_2(Enrich; log2)H3K27me3_1_ChIP/InputH3K27me3_1(Enrich; log2)H3K27me3_2_ChIP/InputH3K27me3_2(Enrich; log2)
2019854
(v2.0)		Smad217126
672/3520.419477/3520.3214101/3521.7652221/3520.65637/352-1.1707235/352-1.1771
SPR_Histone_Erkek_2KaroundTSS
Enrichment of Histone Variant and Modification (+/- 2Kb from TSS)
1.023
H3.3
Rep.1
0.752
H3.3
Rep.2
2.994
H3K4me3
Rep.1
1.852
H3K4me3
Rep.2
-1.148
H3K27me3
Rep.1
-1.159
H3K27me3
Rep.2
DBTMEEGeneEntrezH3.3_1_ChIP/InputH3.3_1(Enrich; log2)H3.3_2_ChIP/InputH3.3_2(Enrich; log2)H3K4me3_1_ChIP/InputH3K4me3_1(Enrich; log2)H3K4me3_2_ChIP/InputH3K4me3_2(Enrich; log2)H3K27me3_1_ChIP/InputH3K27me3_1(Enrich; log2)H3K27me3_2_ChIP/InputH3K27me3_2(Enrich; log2)
2019854
(v2.0)		Smad217126
364/1251.0233229/1250.752589/1252.9935182/1251.852413/125-1.147984/125-1.1585
SPR_Methy_Kobayashi_5KaroundTSS
DBTMEEGeneEntrezTotal_mC_levelsNumber_of_mCsAveraged_Methylation_level
2019854
(v2.0)		Smad217126
46.59412537.28
SPR_Methy_Kobayashi_2KaroundTSS
DBTMEEGeneEntrezTotal_mC_levelsNumber_of_mCsAveraged_Methylation_level
2019854
(v2.0)		Smad217126
13.40558515.77
SOLiD_OocyteTo4C_FPKM_gene_guided N/A
SOLiD_Illumina_Oo_1C_Sperm_FPKM_gene_guided N/A
SOLiD_Partheno1C_FPKM_gene_guided N/A
SOLiD_Illumina_Oo_p1C_Sperm_FPKM_gene_guided N/A
SOLiD_Partheno4C_FPKM_gene_guided N/A
Illumina_Oo_2C_FPKM_gene_guided N/A
SOLiD_SC_Oo_REPLICA_FPKM_gene_guided N/A
NIA60mer N/A
MOE430 N/A
Agilent44K N/A
Proteome N/A