DBTMEE
Database of Transcriptome in Mouse Early Embryos


Gene Search:

DBTMEE:2020214
GeneSp1
SynonymsSp1-1
Descriptiontrans-acting transcription factor 1
LocusNM_013672 UCSC: chr15:102236747-102266835(+) OLP: chr15:102236747-102266835(+)
DB links


Entrez 20683
MGI 98372
Ensembl ENSMUSG00000001280
Vega OTTMUSG00000035159
Featureprotein-coding
GO_BP
  •   19 Terms
      ossification (GO:0001503)
      in utero embryonic development (GO:0001701)
      trophectodermal cell differentiation (GO:0001829)
      liver development (GO:0001889)
      embryonic placenta development (GO:0001892)
      transcription, DNA-templated (GO:0006351)
      regulation of transcription, DNA-templated (GO:0006355)
      regulation of transcription from RNA polymerase II promoter (GO:0006357)
      transcription from RNA polymerase II promoter (GO:0006366)
      megakaryocyte differentiation (GO:0030219)
      lung development (GO:0030324)
      enucleate erythrocyte differentiation (GO:0043353)
      positive regulation by host of viral transcription (GO:0043923)
      positive regulation of transcription, DNA-templated (GO:0045893)
      positive regulation of transcription from RNA polymerase II promoter (GO:0045944)
      embryonic camera-type eye morphogenesis (GO:0048596)
      embryonic skeletal system development (GO:0048706)
      embryonic process involved in female pregnancy (GO:0060136)
      definitive hemopoiesis (GO:0060216)
GO_MF
  •   21 Terms
      RNA polymerase II core promoter proximal region sequence-specific DNA binding (GO:0000978)
      RNA polymerase II core promoter sequence-specific DNA binding (GO:0000979)
      core promoter proximal region sequence-specific DNA binding (GO:0000987)
      RNA polymerase II core promoter proximal region sequence-specific DNA binding transcription factor activity involved in positive regulation of transcription (GO:0001077)
      RNA polymerase II repressing transcription factor binding (GO:0001103)
      nucleic acid binding (GO:0003676)
      DNA binding (GO:0003677)
      double-stranded DNA binding (GO:0003690)
      sequence-specific DNA binding transcription factor activity (GO:0003700)
      protein binding (GO:0005515)
      protein C-terminus binding (GO:0008022)
      transcription factor binding (GO:0008134)
      histone acetyltransferase binding (GO:0035035)
      enhancer binding (GO:0035326)
      protein homodimerization activity (GO:0042803)
      histone deacetylase binding (GO:0042826)
      bHLH transcription factor binding (GO:0043425)
      sequence-specific DNA binding (GO:0043565)
      transcription regulatory region DNA binding (GO:0044212)
      metal ion binding (GO:0046872)
      HMG box domain binding (GO:0071837)
GO_CC
KEGG
  •   2 Terms
Ver2_FPKM
DBTMEEGeneRefSeqEntrezSPR_FPKMOo_FPKM1C_FPKM2C_FPKM4C_FPKMESC_FPKMMEF_FPKMp1C_FPKMp4C_FPKMiPSC_FPKM
2020214
(v2.0)		Sp1NM_01367220683
9.259559.5489115.610423.019824.260129.341921.806413.15523.310826.6119
SPR_Histone_Erkek_5KaroundTSS
DBTMEEGeneEntrezH3.3_1_ChIP/InputH3.3_1(Enrich; log2)H3.3_2_ChIP/InputH3.3_2(Enrich; log2)H3K4me3_1_ChIP/InputH3K4me3_1(Enrich; log2)H3K4me3_2_ChIP/InputH3K4me3_2(Enrich; log2)H3K27me3_1_ChIP/InputH3K27me3_1(Enrich; log2)H3K27me3_2_ChIP/InputH3K27me3_2(Enrich; log2)
2020214
(v2.0)		Sp120683
680/4430.1052414/443-0.2134284/4432.9257773/4432.128125/443-2.0464233/443-1.5202
SPR_Histone_Erkek_2KaroundTSS
DBTMEEGeneEntrezH3.3_1_ChIP/InputH3.3_1(Enrich; log2)H3.3_2_ChIP/InputH3.3_2(Enrich; log2)H3K4me3_1_ChIP/InputH3K4me3_1(Enrich; log2)H3K4me3_2_ChIP/InputH3K4me3_2(Enrich; log2)H3K27me3_1_ChIP/InputH3K27me3_1(Enrich; log2)H3K27me3_2_ChIP/InputH3K27me3_2(Enrich; log2)
2020214
(v2.0)		Sp120683
333/1860.3258176/186-0.1948220/1863.7586493/1862.72112/186-3.928355/186-2.3257
SPR_Methy_Kobayashi_5KaroundTSS
DBTMEEGeneEntrezTotal_mC_levelsNumber_of_mCsAveraged_Methylation_level
2020214
(v2.0)		Sp120683
41.281512632.76
SPR_Methy_Kobayashi_2KaroundTSS
DBTMEEGeneEntrezTotal_mC_levelsNumber_of_mCsAveraged_Methylation_level
2020214
(v2.0)		Sp120683
11.86859312.76
SOLiD_OocyteTo4C_FPKM_gene_guided N/A
SOLiD_Illumina_Oo_1C_Sperm_FPKM_gene_guided N/A
SOLiD_Partheno1C_FPKM_gene_guided N/A
SOLiD_Illumina_Oo_p1C_Sperm_FPKM_gene_guided N/A
SOLiD_Partheno4C_FPKM_gene_guided N/A
Illumina_Oo_2C_FPKM_gene_guided N/A
SOLiD_SC_Oo_REPLICA_FPKM_gene_guided N/A
NIA60mer
DBTMEEArray_Feature_NumberOligo_Parent_CloneUnigeneGeneEntrezU_ClusterNAP_ClusterGene_U/NAPTIGRSwissProtESTOo1C2C4C8CMorulaBlastocyst
0019636
(v1.0)		1040C0174E04-3Mm.4618Sp120683
U043484NAP097405-001Sp1;TC926434,TC827360O89087U,F,22.91113.03223.16363.22593.25463.34593.4883
MOE430 N/A
Agilent44K N/A
Proteome N/A