DBTMEE
Database of Transcriptome in Mouse Early Embryos


Gene Search:

DBTMEE:2020967
GeneTbc1d10a
SynonymsEPI64
Tbc1d10
DescriptionTBC1 domain family, member 10a
LocusNM_134023 UCSC: chr11:4086836-4115508(+) OLP: chr11:4086836-4115508(+)
DB links


Entrez 103724
MGI 2144164
Ensembl ENSMUSG00000034412
Vega OTTMUSG00000005055
Featureprotein-coding
GO_BP
  •   3 Terms
      regulation of Rab GTPase activity (GO:0032313)
      positive regulation of proteolysis (GO:0045862)
      activation of cysteine-type endopeptidase activity (GO:0097202)
GO_MF
GO_CC
KEGG
Ver2_FPKM
Log10 (FPKM+1)
1.094
SPR
1.529
Oo
1.241
1C
0.717
2C
0.841
4C
1.295
ESC
1.342
MEF
1.45
p1C
0.68
p4C
1.334
iPSC
DBTMEEGeneRefSeqEntrezSPR_FPKMOo_FPKM1C_FPKM2C_FPKM4C_FPKMESC_FPKMMEF_FPKMp1C_FPKMp4C_FPKMiPSC_FPKM
2020967
(v2.0)		Tbc1d10aNM_134023103724
11.429332.841816.42764.206295.9403318.720420.976827.16413.7847220.5902
SPR_Histone_Erkek_5KaroundTSS
Enrichment of Histone Variant and Modification (+/- 5Kb from TSS)
0.163
H3.3
Rep.1
-0.149
H3.3
Rep.2
1.95
H3K4me3
Rep.1
0.921
H3K4me3
Rep.2
-2.567
H3K27me3
Rep.1
-1.912
H3K27me3
Rep.2
DBTMEEGeneEntrezH3.3_1_ChIP/InputH3.3_1(Enrich; log2)H3.3_2_ChIP/InputH3.3_2(Enrich; log2)H3K4me3_1_ChIP/InputH3K4me3_1(Enrich; log2)H3K4me3_2_ChIP/InputH3K4me3_2(Enrich; log2)H3K27me3_1_ChIP/InputH3K27me3_1(Enrich; log2)H3K27me3_2_ChIP/InputH3K27me3_2(Enrich; log2)
2020967
(v2.0)		Tbc1d10a103724
703/4400.1629430/440-0.149143/4401.9504332/4400.921117/440-2.5672176/440-1.9122
SPR_Histone_Erkek_2KaroundTSS
Enrichment of Histone Variant and Modification (+/- 2Kb from TSS)
0.568
H3.3
Rep.1
0.139
H3.3
Rep.2
3.185
H3K4me3
Rep.1
2.24
H3K4me3
Rep.2
-1.842
H3K27me3
Rep.1
-1.414
H3K27me3
Rep.2
DBTMEEGeneEntrezH3.3_1_ChIP/InputH3.3_1(Enrich; log2)H3.3_2_ChIP/InputH3.3_2(Enrich; log2)H3K4me3_1_ChIP/InputH3K4me3_1(Enrich; log2)H3K4me3_2_ChIP/InputH3K4me3_2(Enrich; log2)H3K27me3_1_ChIP/InputH3K27me3_1(Enrich; log2)H3K27me3_2_ChIP/InputH3K27me3_2(Enrich; log2)
2020967
(v2.0)		Tbc1d10a103724
339/1600.5675191/1600.1385128/1603.1849304/1602.239510/160-1.841890/160-1.4143
SPR_Methy_Kobayashi_5KaroundTSS
DBTMEEGeneEntrezTotal_mC_levelsNumber_of_mCsAveraged_Methylation_level
2020967
(v2.0)		Tbc1d10a103724
56.036410155.48
SPR_Methy_Kobayashi_2KaroundTSS
DBTMEEGeneEntrezTotal_mC_levelsNumber_of_mCsAveraged_Methylation_level
2020967
(v2.0)		Tbc1d10a103724
24.24796835.66
SOLiD_OocyteTo4C_FPKM_gene_guided N/A
SOLiD_Illumina_Oo_1C_Sperm_FPKM_gene_guided N/A
SOLiD_Partheno1C_FPKM_gene_guided N/A
SOLiD_Illumina_Oo_p1C_Sperm_FPKM_gene_guided N/A
SOLiD_Partheno4C_FPKM_gene_guided N/A
Illumina_Oo_2C_FPKM_gene_guided N/A
SOLiD_SC_Oo_REPLICA_FPKM_gene_guided N/A
NIA60mer N/A
MOE430 N/A
Agilent44K N/A
Proteome N/A