DBTMEE
Database of Transcriptome in Mouse Early Embryos


Gene Search:

DBTMEE:2021057
GeneTcf20
SynonymsSPBP
stromelysin 1 PDGF responsive element binding protein
Descriptiontranscription factor 20
LocusNM_001114140 UCSC: chr15:82639055-82742564(-) OLP: chr15:82639055-82742564(-)
NM_013836 UCSC: chr15:82639055-82742564(-) OLP: chr15:82639055-82742564(-)
DB links


Entrez 21411
MGI 108399
Ensembl ENSMUSG00000041852
Featureprotein-coding
GO_BP
  •   3 Terms
      transcription, DNA-templated (GO:0006351)
      regulation of transcription, DNA-templated (GO:0006355)
      positive regulation of transcription from RNA polymerase II promoter (GO:0045944)
GO_MF
GO_CC
KEGG
Ver2_FPKM
Log10 (FPKM+1)
1.126
SPR
1.915
Oo
2.224
1C
2.091
2C
1.87
4C
1.153
ESC
1.823
MEF
2.266
p1C
1.875
p4C
1.126
iPSC
DBTMEEGeneRefSeqEntrezSPR_FPKMOo_FPKM1C_FPKM2C_FPKM4C_FPKMESC_FPKMMEF_FPKMp1C_FPKMp4C_FPKMiPSC_FPKM
2021057
(v2.0)		Tcf20NM_001114140,NM_01383621411
12.364781.2356166.571122.40773.0913.216565.5527183.57674.020112.3572
SPR_Histone_Erkek_5KaroundTSS
Enrichment of Histone Variant and Modification (+/- 5Kb from TSS)
-0.067
H3.3
Rep.1
-0.177
H3.3
Rep.2
4.152
H3K4me3
Rep.1
2.905
H3K4me3
Rep.2
1.325
H3K27me3
Rep.1
1.305
H3K27me3
Rep.2
DBTMEEGeneEntrezH3.3_1_ChIP/InputH3.3_1(Enrich; log2)H3.3_2_ChIP/InputH3.3_2(Enrich; log2)H3K4me3_1_ChIP/InputH3K4me3_1(Enrich; log2)H3K4me3_2_ChIP/InputH3K4me3_2(Enrich; log2)H3K27me3_1_ChIP/InputH3K27me3_1(Enrich; log2)H3K27me3_2_ChIP/InputH3K27me3_2(Enrich; log2)
2021057
(v2.0)		Tcf2021411
816/599-0.0667574/599-0.1774894/5994.15151789/5992.9046362/5991.32522245/5991.3053
SPR_Histone_Erkek_2KaroundTSS
Enrichment of Histone Variant and Modification (+/- 2Kb from TSS)
0.266
H3.3
Rep.1
0.144
H3.3
Rep.2
5.282
H3K4me3
Rep.1
3.992
H3K4me3
Rep.2
2.045
H3K27me3
Rep.1
1.823
H3K27me3
Rep.2
DBTMEEGeneEntrezH3.3_1_ChIP/InputH3.3_1(Enrich; log2)H3.3_2_ChIP/InputH3.3_2(Enrich; log2)H3K4me3_1_ChIP/InputH3K4me3_1(Enrich; log2)H3K4me3_2_ChIP/InputH3K4me3_2(Enrich; log2)H3K27me3_1_ChIP/InputH3K27me3_1(Enrich; log2)H3K27me3_2_ChIP/InputH3K27me3_2(Enrich; log2)
2021057
(v2.0)		Tcf2021411
424/2470.2658296/2470.1443830/2475.28221577/2473.9922248/2472.04531328/2471.8231
SPR_Methy_Kobayashi_5KaroundTSS
DBTMEEGeneEntrezTotal_mC_levelsNumber_of_mCsAveraged_Methylation_level
2021057
(v2.0)		Tcf2021411
79.440813061.11
SPR_Methy_Kobayashi_2KaroundTSS
DBTMEEGeneEntrezTotal_mC_levelsNumber_of_mCsAveraged_Methylation_level
2021057
(v2.0)		Tcf2021411
28.63667637.68
SOLiD_OocyteTo4C_FPKM_gene_guided N/A
SOLiD_Illumina_Oo_1C_Sperm_FPKM_gene_guided N/A
SOLiD_Partheno1C_FPKM_gene_guided N/A
SOLiD_Illumina_Oo_p1C_Sperm_FPKM_gene_guided N/A
SOLiD_Partheno4C_FPKM_gene_guided N/A
Illumina_Oo_2C_FPKM_gene_guided N/A
SOLiD_SC_Oo_REPLICA_FPKM_gene_guided N/A
NIA60mer
DBTMEEArray_Feature_NumberOligo_Parent_CloneUnigeneGeneEntrezU_ClusterNAP_ClusterGene_U/NAPTIGRSwissProtESTOo1C2C4C8CMorulaBlastocyst
0020451
(v1.0)		10182H3092C03-3Mm.38372Tcf2021411
U035805NAP049179-1TC894389,TC894388,TC875910,TC875908,TC875907U,F,23.59573.57532.97552.97092.51132.71982.4686
MOE430 N/A
Agilent44K N/A
Proteome N/A