DBTMEE
Database of Transcriptome in Mouse Early Embryos


Gene Search:

DBTMEE:2021202
GeneTfdp1
SynonymsDp1
Drtf1
Descriptiontranscription factor Dp 1
LocusNM_001291768 UCSC: chr8:13338751-13378448(+) OLP: chr8:13338751-13378448(+)
NM_001291765 UCSC: chr8:13338751-13378448(+) OLP: chr8:13338751-13378448(+)
NM_001291766 UCSC: chr8:13338804-13378448(+) OLP: chr8:13338804-13378448(+)
NM_009361 UCSC: chr8:13338804-13378448(+) OLP: chr8:13338804-13378448(+)
DB links


Entrez 21781
MGI 101934
Ensembl ENSMUSG00000038482
Featureprotein-coding
GO_BP
GO_MF
GO_CC
KEGG
Ver2_FPKM
Log10 (FPKM+1)
1.193
SPR
1.681
Oo
1.933
1C
1.807
2C
1.737
4C
1.751
ESC
1.986
MEF
1.93
p1C
1.751
p4C
1.673
iPSC
DBTMEEGeneRefSeqEntrezSPR_FPKMOo_FPKM1C_FPKM2C_FPKM4C_FPKMESC_FPKMMEF_FPKMp1C_FPKMp4C_FPKMiPSC_FPKM
2021202
(v2.0)		Tfdp1NM_001291765,NM_001291766,NM_001291768,NM_00936121781
14.600246.998384.722763.105153.594655.416895.810184.108155.300746.0461
SPR_Histone_Erkek_5KaroundTSS
Enrichment of Histone Variant and Modification (+/- 5Kb from TSS)
0.004
H3.3
Rep.1
-0.423
H3.3
Rep.2
0.695
H3K4me3
Rep.1
-0.206
H3K4me3
Rep.2
-1.654
H3K27me3
Rep.1
-1.131
H3K27me3
Rep.2
DBTMEEGeneEntrezH3.3_1_ChIP/InputH3.3_1(Enrich; log2)H3.3_2_ChIP/InputH3.3_2(Enrich; log2)H3K4me3_1_ChIP/InputH3K4me3_1(Enrich; log2)H3K4me3_2_ChIP/InputH3K4me3_2(Enrich; log2)H3K27me3_1_ChIP/InputH3K27me3_1(Enrich; log2)H3K27me3_2_ChIP/InputH3K27me3_2(Enrich; log2)
2021202
(v2.0)		Tfdp121781
744/5200.004420/520-0.423470/5200.6952179/520-0.206239/520-1.6542359/520-1.1306
SPR_Histone_Erkek_2KaroundTSS
Enrichment of Histone Variant and Modification (+/- 2Kb from TSS)
0.337
H3.3
Rep.1
-0.276
H3.3
Rep.2
1.949
H3K4me3
Rep.1
1.026
H3K4me3
Rep.2
-2.366
H3K27me3
Rep.1
-1.394
H3K27me3
Rep.2
DBTMEEGeneEntrezH3.3_1_ChIP/InputH3.3_1(Enrich; log2)H3.3_2_ChIP/InputH3.3_2(Enrich; log2)H3K4me3_1_ChIP/InputH3K4me3_1(Enrich; log2)H3K4me3_2_ChIP/InputH3K4me3_2(Enrich; log2)H3K27me3_1_ChIP/InputH3K27me3_1(Enrich; log2)H3K27me3_2_ChIP/InputH3K27me3_2(Enrich; log2)
2021202
(v2.0)		Tfdp121781
341/1890.337169/189-0.27663/1891.9491154/1891.02618/189-2.366108/189-1.3942
SPR_Methy_Kobayashi_5KaroundTSS
DBTMEEGeneEntrezTotal_mC_levelsNumber_of_mCsAveraged_Methylation_level
2021202
(v2.0)		Tfdp121781
131.03219567.2
SPR_Methy_Kobayashi_2KaroundTSS
DBTMEEGeneEntrezTotal_mC_levelsNumber_of_mCsAveraged_Methylation_level
2021202
(v2.0)		Tfdp121781
36.24259637.75
SOLiD_OocyteTo4C_FPKM_gene_guided N/A
SOLiD_Illumina_Oo_1C_Sperm_FPKM_gene_guided N/A
SOLiD_Partheno1C_FPKM_gene_guided N/A
SOLiD_Illumina_Oo_p1C_Sperm_FPKM_gene_guided N/A
SOLiD_Partheno4C_FPKM_gene_guided N/A
Illumina_Oo_2C_FPKM_gene_guided N/A
SOLiD_SC_Oo_REPLICA_FPKM_gene_guided N/A
NIA60mer
DBTMEEArray_Feature_NumberOligo_Parent_CloneUnigeneGeneEntrezU_ClusterNAP_ClusterGene_U/NAPTIGRSwissProtESTOo1C2C4C8CMorulaBlastocyst
0020592
(v1.0)		12584H3146G01-3Mm.925Tfdp121781
U009104NAP095660-001Tfdp1;TC836444,TC836443Q08639U,F,23.79313.6973.28963.44923.29133.42363.3826
MOE430 N/A
Agilent44K N/A
Proteome N/A