DBTMEE
Database of Transcriptome in Mouse Early Embryos


Gene Search:

DBTMEE:2021271
GeneThoc1
SynonymsNMP-84
DescriptionTHO complex 1
LocusNM_153552 UCSC: chr18:9958178-9995482(+) OLP: chr18:9958178-9995482(+)
DB links


Entrez 225160
MGI 1919668
Ensembl ENSMUSG00000024287
Featureprotein-coding
GO_BP
GO_MF
GO_CC
KEGG
Ver2_FPKM
Log10 (FPKM+1)
0.743
SPR
1.213
Oo
1.354
1C
1.606
2C
1.684
4C
1.392
ESC
1.011
MEF
1.126
p1C
1.544
p4C
1.46
iPSC
DBTMEEGeneRefSeqEntrezSPR_FPKMOo_FPKM1C_FPKM2C_FPKM4C_FPKMESC_FPKMMEF_FPKMp1C_FPKMp4C_FPKMiPSC_FPKM
2021271
(v2.0)		Thoc1NM_153552225160
4.5330615.316721.617239.333847.260123.66659.2662412.371233.976427.8405
SPR_Histone_Erkek_5KaroundTSS
Enrichment of Histone Variant and Modification (+/- 5Kb from TSS)
0.317
H3.3
Rep.1
0.262
H3.3
Rep.2
3.419
H3K4me3
Rep.1
2.349
H3K4me3
Rep.2
0.208
H3K27me3
Rep.1
0.272
H3K27me3
Rep.2
DBTMEEGeneEntrezH3.3_1_ChIP/InputH3.3_1(Enrich; log2)H3.3_2_ChIP/InputH3.3_2(Enrich; log2)H3K4me3_1_ChIP/InputH3K4me3_1(Enrich; log2)H3K4me3_2_ChIP/InputH3K4me3_2(Enrich; log2)H3K27me3_1_ChIP/InputH3K27me3_1(Enrich; log2)H3K27me3_2_ChIP/InputH3K27me3_2(Enrich; log2)
2021271
(v2.0)		Thoc1225160
640/3600.3165468/3600.2616327/3603.4189733/3602.349100/3600.2076659/3600.2722
SPR_Histone_Erkek_2KaroundTSS
Enrichment of Histone Variant and Modification (+/- 2Kb from TSS)
0.401
H3.3
Rep.1
0.36
H3.3
Rep.2
4.577
H3K4me3
Rep.1
3.503
H3K4me3
Rep.2
-0.456
H3K27me3
Rep.1
-0.973
H3K27me3
Rep.2
DBTMEEGeneEntrezH3.3_1_ChIP/InputH3.3_1(Enrich; log2)H3.3_2_ChIP/InputH3.3_2(Enrich; log2)H3K4me3_1_ChIP/InputH3K4me3_1(Enrich; log2)H3K4me3_2_ChIP/InputH3K4me3_2(Enrich; log2)H3K27me3_1_ChIP/InputH3K27me3_1(Enrich; log2)H3K27me3_2_ChIP/InputH3K27me3_2(Enrich; log2)
2021271
(v2.0)		Thoc1225160
283/1500.4007209/1500.3602318/1504.5774686/1503.502626/150-0.4556115/150-0.9734
SPR_Methy_Kobayashi_5KaroundTSS
DBTMEEGeneEntrezTotal_mC_levelsNumber_of_mCsAveraged_Methylation_level
2021271
(v2.0)		Thoc1225160
38.40148744.14
SPR_Methy_Kobayashi_2KaroundTSS
DBTMEEGeneEntrezTotal_mC_levelsNumber_of_mCsAveraged_Methylation_level
2021271
(v2.0)		Thoc1225160
12.73556021.23
SOLiD_OocyteTo4C_FPKM_gene_guided N/A
SOLiD_Illumina_Oo_1C_Sperm_FPKM_gene_guided N/A
SOLiD_Partheno1C_FPKM_gene_guided N/A
SOLiD_Illumina_Oo_p1C_Sperm_FPKM_gene_guided N/A
SOLiD_Partheno4C_FPKM_gene_guided N/A
Illumina_Oo_2C_FPKM_gene_guided N/A
SOLiD_SC_Oo_REPLICA_FPKM_gene_guided N/A
NIA60mer N/A
MOE430 N/A
Agilent44K N/A
Proteome N/A