DBTMEE
Database of Transcriptome in Mouse Early Embryos


Gene Search:

DBTMEE:2022043
GeneTrp53inp1
SynonymsSIP
SIP18
SIP27
Stinp
Teap
Descriptiontransformation related protein 53 inducible nuclear protein 1
LocusNM_021897 UCSC: chr4:11083588-11101524(+) OLP: chr4:11083588-11101524(+)
NM_001199105 UCSC: chr4:11083588-11101524(+) OLP: chr4:11083588-11101524(+)
DB links


Entrez 60599
MGI 1926609
Ensembl ENSMUSG00000028211
Vega OTTMUSG00000004505
Featureprotein-coding
GO_BP
GO_MF
GO_CC
KEGG
Ver2_FPKM
Log10 (FPKM+1)
0.7
SPR
1.469
Oo
1.701
1C
1.852
2C
1.76
4C
1.772
ESC
0.638
MEF
1.6
p1C
1.643
p4C
1.823
iPSC
DBTMEEGeneRefSeqEntrezSPR_FPKMOo_FPKM1C_FPKM2C_FPKM4C_FPKMESC_FPKMMEF_FPKMp1C_FPKMp4C_FPKMiPSC_FPKM
2022043
(v2.0)		Trp53inp1NM_001199105,NM_02189760599
4.0168928.432249.278870.087656.550958.17723.3494538.768842.982265.4861
SPR_Histone_Erkek_5KaroundTSS
Enrichment of Histone Variant and Modification (+/- 5Kb from TSS)
0.17
H3.3
Rep.1
-0.154
H3.3
Rep.2
2.094
H3K4me3
Rep.1
1.244
H3K4me3
Rep.2
-2.068
H3K27me3
Rep.1
-1.751
H3K27me3
Rep.2
DBTMEEGeneEntrezH3.3_1_ChIP/InputH3.3_1(Enrich; log2)H3.3_2_ChIP/InputH3.3_2(Enrich; log2)H3K4me3_1_ChIP/InputH3K4me3_1(Enrich; log2)H3K4me3_2_ChIP/InputH3K4me3_2(Enrich; log2)H3K27me3_1_ChIP/InputH3K27me3_1(Enrich; log2)H3K27me3_2_ChIP/InputH3K27me3_2(Enrich; log2)
2022043
(v2.0)		Trp53inp160599
610/3800.1696370/380-0.1542137/3802.0944359/3801.243821/380-2.0684170/380-1.7508
SPR_Histone_Erkek_2KaroundTSS
Enrichment of Histone Variant and Modification (+/- 2Kb from TSS)
0.781
H3.3
Rep.1
0.168
H3.3
Rep.2
3.436
H3K4me3
Rep.1
2.591
H3K4me3
Rep.2
-3.083
H3K27me3
Rep.1
-1.887
H3K27me3
Rep.2
DBTMEEGeneEntrezH3.3_1_ChIP/InputH3.3_1(Enrich; log2)H3.3_2_ChIP/InputH3.3_2(Enrich; log2)H3K4me3_1_ChIP/InputH3K4me3_1(Enrich; log2)H3K4me3_2_ChIP/InputH3K4me3_2(Enrich; log2)H3K27me3_1_ChIP/InputH3K27me3_1(Enrich; log2)H3K27me3_2_ChIP/InputH3K27me3_2(Enrich; log2)
2022043
(v2.0)		Trp53inp160599
337/1370.7814167/1370.1683132/1373.4359333/1372.59073/137-3.083455/137-1.8873
SPR_Methy_Kobayashi_5KaroundTSS
DBTMEEGeneEntrezTotal_mC_levelsNumber_of_mCsAveraged_Methylation_level
2022043
(v2.0)		Trp53inp160599
36.55498742.02
SPR_Methy_Kobayashi_2KaroundTSS
DBTMEEGeneEntrezTotal_mC_levelsNumber_of_mCsAveraged_Methylation_level
2022043
(v2.0)		Trp53inp160599
13.71166321.76
SOLiD_OocyteTo4C_FPKM_gene_guided N/A
SOLiD_Illumina_Oo_1C_Sperm_FPKM_gene_guided N/A
SOLiD_Partheno1C_FPKM_gene_guided N/A
SOLiD_Illumina_Oo_p1C_Sperm_FPKM_gene_guided N/A
SOLiD_Partheno4C_FPKM_gene_guided N/A
Illumina_Oo_2C_FPKM_gene_guided N/A
SOLiD_SC_Oo_REPLICA_FPKM_gene_guided N/A
NIA60mer N/A
MOE430 N/A
Agilent44K N/A
Proteome N/A