DBTMEE
Database of Transcriptome in Mouse Early Embryos


Gene Search:

DBTMEE:2022289
GeneTxnip
SynonymsHyplip1
mVDUP1
THIF
VDUP1
Descriptionthioredoxin interacting protein
LocusNM_023719 UCSC: chr3:96361880-96365780(+) OLP: chr3:96361880-96365780(+)
NM_001009935 UCSC: chr3:96361880-96365780(+) OLP: chr3:96361880-96365780(+)
DB links


Entrez 56338
MGI 1889549
Ensembl ENSMUSG00000038393
Vega OTTMUSG00000021271
Featureprotein-coding
GO_BP
  •   13 Terms
      negative regulation of transcription from RNA polymerase II promoter (GO:0000122)
      transcription, DNA-templated (GO:0006351)
      regulation of transcription, DNA-templated (GO:0006355)
      protein import into nucleus (GO:0006606)
      response to oxidative stress (GO:0006979)
      cell cycle (GO:0007049)
      keratinocyte differentiation (GO:0030216)
      regulation of cell proliferation (GO:0042127)
      positive regulation of apoptotic process (GO:0043065)
      negative regulation of catalytic activity (GO:0043086)
      platelet-derived growth factor receptor signaling pathway (GO:0048008)
      negative regulation of cell division (GO:0051782)
      cellular response to tumor cell (GO:0071228)
GO_MF
GO_CC
KEGG
Ver2_FPKM
Log10 (FPKM+1)
1.855
SPR
2.839
Oo
1.956
1C
1.17
2C
1.031
4C
2.615
ESC
1.811
MEF
2.105
p1C
1.415
p4C
2.503
iPSC
DBTMEEGeneRefSeqEntrezSPR_FPKMOo_FPKM1C_FPKM2C_FPKM4C_FPKMESC_FPKMMEF_FPKMp1C_FPKMp4C_FPKMiPSC_FPKM
2022289
(v2.0)		TxnipNM_001009935,NM_02371956338
70.5831688.82789.435313.78239.7428411.26163.7379126.36925.0156317.289
SPR_Histone_Erkek_5KaroundTSS
Enrichment of Histone Variant and Modification (+/- 5Kb from TSS)
-0.035
H3.3
Rep.1
-0.406
H3.3
Rep.2
3.008
H3K4me3
Rep.1
2.764
H3K4me3
Rep.2
-2.732
H3K27me3
Rep.1
-2.417
H3K27me3
Rep.2
DBTMEEGeneEntrezH3.3_1_ChIP/InputH3.3_1(Enrich; log2)H3.3_2_ChIP/InputH3.3_2(Enrich; log2)H3K4me3_1_ChIP/InputH3K4me3_1(Enrich; log2)H3K4me3_2_ChIP/InputH3K4me3_2(Enrich; log2)H3K27me3_1_ChIP/InputH3K27me3_1(Enrich; log2)H3K27me3_2_ChIP/InputH3K27me3_2(Enrich; log2)
2022289
(v2.0)		Txnip56338
649/466-0.0349381/466-0.4057316/4663.00811264/4662.764316/466-2.7318131/466-2.4166
SPR_Histone_Erkek_2KaroundTSS
Enrichment of Histone Variant and Modification (+/- 2Kb from TSS)
0.124
H3.3
Rep.1
-0.124
H3.3
Rep.2
3.785
H3K4me3
Rep.1
3.544
H3K4me3
Rep.2
-1.992
H3K27me3
Rep.1
-1.964
H3K27me3
Rep.2
DBTMEEGeneEntrezH3.3_1_ChIP/InputH3.3_1(Enrich; log2)H3.3_2_ChIP/InputH3.3_2(Enrich; log2)H3K4me3_1_ChIP/InputH3K4me3_1(Enrich; log2)H3K4me3_2_ChIP/InputH3K4me3_2(Enrich; log2)H3K27me3_1_ChIP/InputH3K27me3_1(Enrich; log2)H3K27me3_2_ChIP/InputH3K27me3_2(Enrich; log2)
2022289
(v2.0)		Txnip56338
277/1780.1245177/178-0.1236215/1783.7851836/1783.544410/178-1.991968/178-1.9639
SPR_Methy_Kobayashi_5KaroundTSS
DBTMEEGeneEntrezTotal_mC_levelsNumber_of_mCsAveraged_Methylation_level
2022289
(v2.0)		Txnip56338
93.892118251.59
SPR_Methy_Kobayashi_2KaroundTSS
DBTMEEGeneEntrezTotal_mC_levelsNumber_of_mCsAveraged_Methylation_level
2022289
(v2.0)		Txnip56338
21.102510120.89
SOLiD_OocyteTo4C_FPKM_gene_guided N/A
SOLiD_Illumina_Oo_1C_Sperm_FPKM_gene_guided N/A
SOLiD_Partheno1C_FPKM_gene_guided N/A
SOLiD_Illumina_Oo_p1C_Sperm_FPKM_gene_guided N/A
SOLiD_Partheno4C_FPKM_gene_guided N/A
Illumina_Oo_2C_FPKM_gene_guided N/A
SOLiD_SC_Oo_REPLICA_FPKM_gene_guided N/A
NIA60mer
DBTMEEArray_Feature_NumberOligo_Parent_CloneUnigeneGeneEntrezU_ClusterNAP_ClusterGene_U/NAPTIGRSwissProtESTOo1C2C4C8CMorulaBlastocyst
0021655
(v1.0)		18375L0204D03-3Mm.77432Txnip56338
U003599NAP001287-001Txnip;TC939884,TC939866,TC939865P14148U,F,24.36524.41884.61944.42983.99654.37444.1233
MOE430 N/A
Agilent44K N/A
Proteome N/A