DBTMEE
Database of Transcriptome in Mouse Early Embryos


Gene Search:

DBTMEE:2023345
GeneYbx1
SynonymsdbpB
DNA binding protein B
EF1A
MSY1
Nsep1
YB-1
DescriptionY box protein 1
LocusNM_011732 UCSC: chr4:118949932-118967118(-) OLP: chr4:118949932-118967118(-)
DB links


Entrez 22608
MGI 99146
Ensembl ENSMUSG00000028639
Vega OTTMUSG00000009259
Featureprotein-coding
GO_BP
  •   13 Terms
      negative regulation of transcription from RNA polymerase II promoter (GO:0000122)
      in utero embryonic development (GO:0001701)
      transcription, DNA-templated (GO:0006351)
      regulation of transcription, DNA-templated (GO:0006355)
      mRNA processing (GO:0006397)
      positive regulation of cell proliferation (GO:0008284)
      RNA splicing (GO:0008380)
      negative regulation of apoptotic process (GO:0043066)
      positive regulation of transcription from RNA polymerase II promoter (GO:0045944)
      negative regulation of insulin receptor signaling pathway (GO:0046627)
      negative regulation of striated muscle cell differentiation (GO:0051154)
      positive regulation of cell division (GO:0051781)
      CRD-mediated mRNA stabilization (GO:0070934)
GO_MF
GO_CC
KEGG
Ver2_FPKM
DBTMEEGeneRefSeqEntrezSPR_FPKMOo_FPKM1C_FPKM2C_FPKM4C_FPKMESC_FPKMMEF_FPKMp1C_FPKMp4C_FPKMiPSC_FPKM
2023345
(v2.0)		Ybx1NM_01173222608
191.611115.039257.356386.595547.094357.714107.802280.682528.681475.737
SPR_Histone_Erkek_5KaroundTSS
DBTMEEGeneEntrezH3.3_1_ChIP/InputH3.3_1(Enrich; log2)H3.3_2_ChIP/InputH3.3_2(Enrich; log2)H3K4me3_1_ChIP/InputH3K4me3_1(Enrich; log2)H3K4me3_2_ChIP/InputH3K4me3_2(Enrich; log2)H3K27me3_1_ChIP/InputH3K27me3_1(Enrich; log2)H3K27me3_2_ChIP/InputH3K27me3_2(Enrich; log2)
2023345
(v2.0)		Ybx122608
658/4520.0289412/452-0.2493205/4522.4292574/4521.670543/452-1.3162520/452-0.3962
SPR_Histone_Erkek_2KaroundTSS
DBTMEEGeneEntrezH3.3_1_ChIP/InputH3.3_1(Enrich; log2)H3.3_2_ChIP/InputH3.3_2(Enrich; log2)H3K4me3_1_ChIP/InputH3K4me3_1(Enrich; log2)H3K4me3_2_ChIP/InputH3K4me3_2(Enrich; log2)H3K27me3_1_ChIP/InputH3K27me3_1(Enrich; log2)H3K27me3_2_ChIP/InputH3K27me3_2(Enrich; log2)
2023345
(v2.0)		Ybx122608
310/1820.2542171/182-0.2049198/1823.6368538/1822.87787/182-2.482688/182-1.631
SPR_Methy_Kobayashi_5KaroundTSS
DBTMEEGeneEntrezTotal_mC_levelsNumber_of_mCsAveraged_Methylation_level
2023345
(v2.0)		Ybx122608
55.102116234.01
SPR_Methy_Kobayashi_2KaroundTSS
DBTMEEGeneEntrezTotal_mC_levelsNumber_of_mCsAveraged_Methylation_level
2023345
(v2.0)		Ybx122608
15.694811513.65
SOLiD_OocyteTo4C_FPKM_gene_guided N/A
SOLiD_Illumina_Oo_1C_Sperm_FPKM_gene_guided N/A
SOLiD_Partheno1C_FPKM_gene_guided N/A
SOLiD_Illumina_Oo_p1C_Sperm_FPKM_gene_guided N/A
SOLiD_Partheno4C_FPKM_gene_guided N/A
Illumina_Oo_2C_FPKM_gene_guided N/A
SOLiD_SC_Oo_REPLICA_FPKM_gene_guided N/A
NIA60mer N/A
MOE430 N/A
Agilent44K N/A
Proteome N/A