DBTMEE
Database of Transcriptome in Mouse Early Embryos


Gene Search:

DBTMEE:2023391
GeneZbed3
Synonyms
Descriptionzinc finger, BED domain containing 3
LocusNM_028106 UCSC: chr13:96095192-96107796(+) OLP: chr13:96095192-96107796(+)
DB links


Entrez 72114
MGI 1919364
Ensembl ENSMUSG00000041995
Featureprotein-coding
GO_BP
  •   5 Terms
      negative regulation of protein phosphorylation (GO:0001933)
      Wnt signaling pathway (GO:0016055)
      positive regulation of transcription from RNA polymerase II promoter (GO:0045944)
      protein stabilization (GO:0050821)
      positive regulation of canonical Wnt signaling pathway (GO:0090263)
GO_MF
GO_CC
KEGG
Ver2_FPKM
Log10 (FPKM+1)
1.208
SPR
3.594
Oo
3.831
1C
2.562
2C
1.82
4C
0.874
ESC
1.119
MEF
3.999
p1C
2.208
p4C
0.929
iPSC
DBTMEEGeneRefSeqEntrezSPR_FPKMOo_FPKM1C_FPKM2C_FPKM4C_FPKMESC_FPKMMEF_FPKMp1C_FPKMp4C_FPKMiPSC_FPKM
2023391
(v2.0)		Zbed3NM_02810672114
15.15473928.446776.78363.89165.13396.4770412.13919983.06160.597.49398
SPR_Histone_Erkek_5KaroundTSS
Enrichment of Histone Variant and Modification (+/- 5Kb from TSS)
0.067
H3.3
Rep.1
-0.074
H3.3
Rep.2
1.919
H3K4me3
Rep.1
1.043
H3K4me3
Rep.2
-0.75
H3K27me3
Rep.1
-0.739
H3K27me3
Rep.2
DBTMEEGeneEntrezH3.3_1_ChIP/InputH3.3_1(Enrich; log2)H3.3_2_ChIP/InputH3.3_2(Enrich; log2)H3K4me3_1_ChIP/InputH3K4me3_1(Enrich; log2)H3K4me3_2_ChIP/InputH3K4me3_2(Enrich; log2)H3K27me3_1_ChIP/InputH3K27me3_1(Enrich; log2)H3K27me3_2_ChIP/InputH3K27me3_2(Enrich; log2)
2023391
(v2.0)		Zbed372114
653/4370.0665450/437-0.0737139/4371.9193359/4371.043462/437-0.7501396/437-0.7393
SPR_Histone_Erkek_2KaroundTSS
Enrichment of Histone Variant and Modification (+/- 2Kb from TSS)
0.433
H3.3
Rep.1
0.259
H3.3
Rep.2
2.979
H3K4me3
Rep.1
2.232
H3K4me3
Rep.2
-1.81
H3K27me3
Rep.1
-1.054
H3K27me3
Rep.2
DBTMEEGeneEntrezH3.3_1_ChIP/InputH3.3_1(Enrich; log2)H3.3_2_ChIP/InputH3.3_2(Enrich; log2)H3K4me3_1_ChIP/InputH3K4me3_1(Enrich; log2)H3K4me3_2_ChIP/InputH3K4me3_2(Enrich; log2)H3K27me3_1_ChIP/InputH3K27me3_1(Enrich; log2)H3K27me3_2_ChIP/InputH3K27me3_2(Enrich; log2)
2023391
(v2.0)		Zbed372114
330/1710.4335222/1710.259118/1712.9791323/1712.232211/171-1.8098124/171-1.0539
SPR_Methy_Kobayashi_5KaroundTSS
DBTMEEGeneEntrezTotal_mC_levelsNumber_of_mCsAveraged_Methylation_level
2023391
(v2.0)		Zbed372114
75.681116545.87
SPR_Methy_Kobayashi_2KaroundTSS
DBTMEEGeneEntrezTotal_mC_levelsNumber_of_mCsAveraged_Methylation_level
2023391
(v2.0)		Zbed372114
16.946410016.95
SOLiD_OocyteTo4C_FPKM_gene_guided N/A
SOLiD_Illumina_Oo_1C_Sperm_FPKM_gene_guided N/A
SOLiD_Partheno1C_FPKM_gene_guided N/A
SOLiD_Illumina_Oo_p1C_Sperm_FPKM_gene_guided N/A
SOLiD_Partheno4C_FPKM_gene_guided N/A
Illumina_Oo_2C_FPKM_gene_guided N/A
SOLiD_SC_Oo_REPLICA_FPKM_gene_guided N/A
NIA60mer N/A
MOE430 N/A
Agilent44K N/A
Proteome N/A