DBTMEE
Database of Transcriptome in Mouse Early Embryos


Gene Search:

DBTMEE:2009730
GeneH3f3b
SynonymsH3.3B
DescriptionH3 histone, family 3B
LocusNM_008211 UCSC: chr11:115883275-115885818(-) OLP: chr11:115883275-115885818(-)
DB links


Entrez 15081
MGI 1101768
Ensembl ENSMUSG00000016559
Vega OTTMUSG00000003689
Featureprotein-coding
GO_BP
GO_MF
  •   3 Terms
      RNA polymerase II core promoter sequence-specific DNA binding (GO:0000979)
      RNA polymerase II distal enhancer sequence-specific DNA binding (GO:0000980)
      nucleosomal DNA binding (GO:0031492)
GO_CC
KEGG
  •   1 Terms
      Systemic lupus erythematosus (mmu05322)
Ver2_FPKM
DBTMEEGeneRefSeqEntrezSPR_FPKMOo_FPKM1C_FPKM2C_FPKM4C_FPKMESC_FPKMMEF_FPKMp1C_FPKMp4C_FPKMiPSC_FPKM
2009730
(v2.0)		H3f3bNM_00821115081
254.191353.152692.229314.73707.432771.713199.271535.618657.621858.826
SPR_Histone_Erkek_5KaroundTSS
DBTMEEGeneEntrezH3.3_1_ChIP/InputH3.3_1(Enrich; log2)H3.3_2_ChIP/InputH3.3_2(Enrich; log2)H3K4me3_1_ChIP/InputH3K4me3_1(Enrich; log2)H3K4me3_2_ChIP/InputH3K4me3_2(Enrich; log2)H3K27me3_1_ChIP/InputH3K27me3_1(Enrich; log2)H3K27me3_2_ChIP/InputH3K27me3_2(Enrich; log2)
2009730
(v2.0)		H3f3b15081
570/3260.2925422/3260.2555262/3263.2385810/3262.63531/326-1.3092193/326-1.3488
SPR_Histone_Erkek_2KaroundTSS
DBTMEEGeneEntrezH3.3_1_ChIP/InputH3.3_1(Enrich; log2)H3.3_2_ChIP/InputH3.3_2(Enrich; log2)H3K4me3_1_ChIP/InputH3K4me3_1(Enrich; log2)H3K4me3_2_ChIP/InputH3K4me3_2(Enrich; log2)H3K27me3_1_ChIP/InputH3K27me3_1(Enrich; log2)H3K27me3_2_ChIP/InputH3K27me3_2(Enrich; log2)
2009730
(v2.0)		H3f3b15081
263/1310.4895212/1310.5747245/1314.3824646/1313.6085/131-2.435843/131-2.1675
SPR_Methy_Kobayashi_5KaroundTSS
DBTMEEGeneEntrezTotal_mC_levelsNumber_of_mCsAveraged_Methylation_level
2009730
(v2.0)		H3f3b15081
43.929811338.88
SPR_Methy_Kobayashi_2KaroundTSS
DBTMEEGeneEntrezTotal_mC_levelsNumber_of_mCsAveraged_Methylation_level
2009730
(v2.0)		H3f3b15081
14.33667818.38
SOLiD_OocyteTo4C_FPKM_gene_guided N/A
SOLiD_Illumina_Oo_1C_Sperm_FPKM_gene_guided N/A
SOLiD_Partheno1C_FPKM_gene_guided N/A
SOLiD_Illumina_Oo_p1C_Sperm_FPKM_gene_guided N/A
SOLiD_Partheno4C_FPKM_gene_guided N/A
Illumina_Oo_2C_FPKM_gene_guided N/A
SOLiD_SC_Oo_REPLICA_FPKM_gene_guided N/A
NIA60mer
DBTMEEArray_Feature_NumberOligo_Parent_CloneUnigeneGeneEntrezU_ClusterNAP_ClusterGene_U/NAPTIGRSwissProtESTOo1C2C4C8CMorulaBlastocyst
0009851
(v1.0)		5947H3013D08-3Mm.18516H3f3b15081
U033638NAP001504-001TC840943,TC840940Q9D0H3U,F,24.67734.53723.97074.79734.1344.33034.3877
MOE430 N/A
Agilent44K N/A
Proteome N/A