DBTMEE
Database of Transcriptome in Mouse Early Embryos


Gene Search:

DBTMEE:2017639
GenePtbp1
SynonymshnRNP I
Ptb
Descriptionpolypyrimidine tract binding protein 1
LocusNM_008956 UCSC: chr10:79317177-79327180(+) OLP: chr10:79317177-79327180(+)
NM_001077363 UCSC: chr10:79317177-79327180(+) OLP: chr10:79317177-79327180(+)
NM_001283013 UCSC: chr10:79317177-79327180(+) OLP: chr10:79317177-79327180(+)
DB links


Entrez 19205
MGI 97791
Ensembl ENSMUSG00000006498
Vega OTTMUSG00000035444
Featureprotein-coding
GO_BP
  •   6 Terms
      regulation of alternative mRNA splicing, via spliceosome (GO:0000381)
      mRNA processing (GO:0006397)
      RNA splicing (GO:0008380)
      negative regulation of RNA splicing (GO:0033119)
      negative regulation of mRNA splicing, via spliceosome (GO:0048025)
      negative regulation of muscle cell differentiation (GO:0051148)
GO_MF
GO_CC
KEGG
Ver2_FPKM
DBTMEEGeneRefSeqEntrezSPR_FPKMOo_FPKM1C_FPKM2C_FPKM4C_FPKMESC_FPKMMEF_FPKMp1C_FPKMp4C_FPKMiPSC_FPKM
2017639
(v2.0)		Ptbp1NM_001077363,NM_001283013,NM_00895619205
69.801274.0558171.212175.915145.152203.917119.412271.805148.653201.95
SPR_Histone_Erkek_5KaroundTSS
DBTMEEGeneEntrezH3.3_1_ChIP/InputH3.3_1(Enrich; log2)H3.3_2_ChIP/InputH3.3_2(Enrich; log2)H3K4me3_1_ChIP/InputH3K4me3_1(Enrich; log2)H3K4me3_2_ChIP/InputH3K4me3_2(Enrich; log2)H3K27me3_1_ChIP/InputH3K27me3_1(Enrich; log2)H3K27me3_2_ChIP/InputH3K27me3_2(Enrich; log2)
2017639
(v2.0)		Ptbp119205
815/596-0.0612365/596-0.8218260/5962.3807870/5961.87266/596-4.3641141/596-2.666
SPR_Histone_Erkek_2KaroundTSS
DBTMEEGeneEntrezH3.3_1_ChIP/InputH3.3_1(Enrich; log2)H3.3_2_ChIP/InputH3.3_2(Enrich; log2)H3K4me3_1_ChIP/InputH3K4me3_1(Enrich; log2)H3K4me3_2_ChIP/InputH3K4me3_2(Enrich; log2)H3K27me3_1_ChIP/InputH3K27me3_1(Enrich; log2)H3K27me3_2_ChIP/InputH3K27me3_2(Enrich; log2)
2017639
(v2.0)		Ptbp119205
400/2520.1532170/252-0.6806199/2523.1998673/2522.73632/252-4.358250/252-2.8954
SPR_Methy_Kobayashi_5KaroundTSS
DBTMEEGeneEntrezTotal_mC_levelsNumber_of_mCsAveraged_Methylation_level
2017639
(v2.0)		Ptbp119205
78.457122235.34
SPR_Methy_Kobayashi_2KaroundTSS
DBTMEEGeneEntrezTotal_mC_levelsNumber_of_mCsAveraged_Methylation_level
2017639
(v2.0)		Ptbp119205
19.968315612.8
SOLiD_OocyteTo4C_FPKM_gene_guided N/A
SOLiD_Illumina_Oo_1C_Sperm_FPKM_gene_guided N/A
SOLiD_Partheno1C_FPKM_gene_guided N/A
SOLiD_Illumina_Oo_p1C_Sperm_FPKM_gene_guided N/A
SOLiD_Partheno4C_FPKM_gene_guided N/A
Illumina_Oo_2C_FPKM_gene_guided N/A
SOLiD_SC_Oo_REPLICA_FPKM_gene_guided N/A
NIA60mer
DBTMEEArray_Feature_NumberOligo_Parent_CloneUnigeneGeneEntrezU_ClusterNAP_ClusterGene_U/NAPTIGRSwissProtESTOo1C2C4C8CMorulaBlastocyst
0017137
(v1.0)		5848H3010A04-3Mm.19117Ptbp119205
U011726NAP031326-1Ptbp1;TC908500P17225U,F,23.25593.32352.70093.04453.17843.20283.2074
MOE430 N/A
Agilent44K N/A
Proteome N/A