DBTMEE
Database of Transcriptome in Mouse Early Embryos


Gene Search:

DBTMEE:2022033
GeneTrnt1
SynonymsCGI-47
DescriptiontRNA nucleotidyl transferase, CCA-adding, 1
LocusNM_001242358 UCSC: chr6:106719132-106732468(+) OLP: chr6:106719132-106732468(+)
NM_001242360 UCSC: chr6:106719132-106727675(+) OLP: chr6:106719132-106727675(+)
NM_027296 UCSC: chr6:106719132-106732468(+) OLP: chr6:106719132-106732468(+)
DB links


Entrez 70047
MGI 1917297
Ensembl ENSMUSG00000013736
Vega OTTMUSG00000023531
Featureprotein-coding
GO_BP
GO_MF
GO_CC
KEGG
Ver2_FPKM
DBTMEEGeneRefSeqEntrezSPR_FPKMOo_FPKM1C_FPKM2C_FPKM4C_FPKMESC_FPKMMEF_FPKMp1C_FPKMp4C_FPKMiPSC_FPKM
2022033
(v2.0)		Trnt1NM_001242358,NM_001242360,NM_02729670047
11.211355.772685.819871.347675.463434.076927.463466.780175.176932.6139
SPR_Histone_Erkek_5KaroundTSS
DBTMEEGeneEntrezH3.3_1_ChIP/InputH3.3_1(Enrich; log2)H3.3_2_ChIP/InputH3.3_2(Enrich; log2)H3K4me3_1_ChIP/InputH3K4me3_1(Enrich; log2)H3K4me3_2_ChIP/InputH3K4me3_2(Enrich; log2)H3K27me3_1_ChIP/InputH3K27me3_1(Enrich; log2)H3K27me3_2_ChIP/InputH3K27me3_2(Enrich; log2)
2022033
(v2.0)		Trnt170047
633/3340.4085507/3340.4847821/3344.84892978/3344.477459/334-0.4369389/334-0.3781
SPR_Histone_Erkek_2KaroundTSS
DBTMEEGeneEntrezH3.3_1_ChIP/InputH3.3_1(Enrich; log2)H3.3_2_ChIP/InputH3.3_2(Enrich; log2)H3K4me3_1_ChIP/InputH3K4me3_1(Enrich; log2)H3K4me3_2_ChIP/InputH3K4me3_2(Enrich; log2)H3K27me3_1_ChIP/InputH3K27me3_1(Enrich; log2)H3K27me3_2_ChIP/InputH3K27me3_2(Enrich; log2)
2022033
(v2.0)		Trnt170047
263/1380.415195/1380.3802395/1385.00031272/1384.510712/138-1.393263/138-1.7067
SPR_Methy_Kobayashi_5KaroundTSS
DBTMEEGeneEntrezTotal_mC_levelsNumber_of_mCsAveraged_Methylation_level
2022033
(v2.0)		Trnt170047
40.977612034.15
SPR_Methy_Kobayashi_2KaroundTSS
DBTMEEGeneEntrezTotal_mC_levelsNumber_of_mCsAveraged_Methylation_level
2022033
(v2.0)		Trnt170047
8.02018010.03
SOLiD_OocyteTo4C_FPKM_gene_guided N/A
SOLiD_Illumina_Oo_1C_Sperm_FPKM_gene_guided N/A
SOLiD_Partheno1C_FPKM_gene_guided N/A
SOLiD_Illumina_Oo_p1C_Sperm_FPKM_gene_guided N/A
SOLiD_Partheno4C_FPKM_gene_guided N/A
Illumina_Oo_2C_FPKM_gene_guided N/A
SOLiD_SC_Oo_REPLICA_FPKM_gene_guided N/A
NIA60mer
DBTMEEArray_Feature_NumberOligo_Parent_CloneUnigeneGeneEntrezU_ClusterNAP_ClusterGene_U/NAPTIGRSwissProtESTOo1C2C4C8CMorulaBlastocyst
0021405
(v1.0)		1204C0185C05-3Mm.196332Trnt170047
U027701NAP000952-001AF229032;TC849128Q9JKR4U,F,23.61513.65593.71573.58433.4923.62263.543
MOE430 N/A
Agilent44K N/A
Proteome N/A