DBTMEE
Database of Transcriptome in Mouse Early Embryos


Gene Search:

DBTMEE:2004868
GeneCnot7
SynonymsCaf1
DescriptionCCR4-NOT transcription complex, subunit 7
LocusNM_001271543 UCSC: chr8:41577892-41597108(-) OLP: chr8:41577892-41597108(-)
NM_011135 UCSC: chr8:41577892-41597108(-) OLP: chr8:41577892-41597108(-)
NM_001271542 UCSC: chr8:41577892-41601201(-) OLP: chr8:41577892-41601201(-)
DB links


Entrez 18983
MGI 1298230
Ensembl ENSMUSG00000031601
Vega OTTMUSG00000026076
Featureprotein-coding
GO_BP
  •   14 Terms
      nuclear-transcribed mRNA poly(A) tail shortening (GO:0000289)
      deadenylation-dependent decapping of nuclear-transcribed mRNA (GO:0000290)
      transcription, DNA-templated (GO:0006351)
      regulation of transcription, DNA-templated (GO:0006355)
      regulation of translation (GO:0006417)
      positive regulation of cell proliferation (GO:0008284)
      negative regulation of cell proliferation (GO:0008285)
      gene silencing by RNA (GO:0031047)
      cytoplasmic mRNA processing body assembly (GO:0033962)
      exonucleolytic nuclear-transcribed mRNA catabolic process involved in deadenylation-dependent decay (GO:0043928)
      positive regulation of transcription from RNA polymerase II promoter (GO:0045944)
      positive regulation of nuclear-transcribed mRNA poly(A) tail shortening (GO:0060213)
      RNA phosphodiester bond hydrolysis, exonucleolytic (GO:0090503)
      positive regulation of nuclear-transcribed mRNA catabolic process, deadenylation-dependent decay (GO:1900153)
GO_MF
GO_CC
KEGG
  •   1 Terms
Ver2_FPKM
DBTMEEGeneRefSeqEntrezSPR_FPKMOo_FPKM1C_FPKM2C_FPKM4C_FPKMESC_FPKMMEF_FPKMp1C_FPKMp4C_FPKMiPSC_FPKM
2004868
(v2.0)		Cnot7NM_001271542,NM_001271543,NM_01113518983
15.1089146.601230.91161.92543.62628.721519.6002183.21537.005725.0931
SPR_Histone_Erkek_5KaroundTSS
DBTMEEGeneEntrezH3.3_1_ChIP/InputH3.3_1(Enrich; log2)H3.3_2_ChIP/InputH3.3_2(Enrich; log2)H3K4me3_1_ChIP/InputH3K4me3_1(Enrich; log2)H3K4me3_2_ChIP/InputH3K4me3_2(Enrich; log2)H3K27me3_1_ChIP/InputH3K27me3_1(Enrich; log2)H3K27me3_2_ChIP/InputH3K27me3_2(Enrich; log2)
2004868
(v2.0)		Cnot718983
671/3650.3647557/3650.4924471/3653.92481069/3652.87323/365-1.8854134/365-2.0327
SPR_Histone_Erkek_2KaroundTSS
DBTMEEGeneEntrezH3.3_1_ChIP/InputH3.3_1(Enrich; log2)H3.3_2_ChIP/InputH3.3_2(Enrich; log2)H3K4me3_1_ChIP/InputH3K4me3_1(Enrich; log2)H3K4me3_2_ChIP/InputH3K4me3_2(Enrich; log2)H3K27me3_1_ChIP/InputH3K27me3_1(Enrich; log2)H3K27me3_2_ChIP/InputH3K27me3_2(Enrich; log2)
2004868
(v2.0)		Cnot718983
387/1620.74259/1620.5579456/1624.9931987/1623.91766/162-2.511356/162-2.1022
SPR_Methy_Kobayashi_5KaroundTSS
DBTMEEGeneEntrezTotal_mC_levelsNumber_of_mCsAveraged_Methylation_level
2004868
(v2.0)		Cnot718983
54.11411845.86
SPR_Methy_Kobayashi_2KaroundTSS
DBTMEEGeneEntrezTotal_mC_levelsNumber_of_mCsAveraged_Methylation_level
2004868
(v2.0)		Cnot718983
9.71597013.88
SOLiD_OocyteTo4C_FPKM_gene_guided N/A
SOLiD_Illumina_Oo_1C_Sperm_FPKM_gene_guided N/A
SOLiD_Partheno1C_FPKM_gene_guided N/A
SOLiD_Illumina_Oo_p1C_Sperm_FPKM_gene_guided N/A
SOLiD_Partheno4C_FPKM_gene_guided N/A
Illumina_Oo_2C_FPKM_gene_guided N/A
SOLiD_SC_Oo_REPLICA_FPKM_gene_guided N/A
NIA60mer
DBTMEEArray_Feature_NumberOligo_Parent_CloneUnigeneGeneEntrezU_ClusterNAP_ClusterGene_U/NAPTIGRSwissProtESTOo1C2C4C8CMorulaBlastocyst
0004941
(v1.0)		8133H3060D01-3Mm.206770Cnot718983
Cnot74.06654.03613.26652.98682.54612.74982.6346
MOE430 N/A
Agilent44K N/A
Proteome N/A