DBTMEE:0004941
| Gene | Cnot7 |
| Synonyms | Caf1 |
| Description | CCR4-NOT transcription complex, subunit 7 |
| Locus | NM_001271543 UCSC: chr8:41577892-41597108(-) OLP: chr8:41577892-41597108(-)
NM_011135 UCSC: chr8:41577892-41597108(-) OLP: chr8:41577892-41597108(-)
NM_001271542 UCSC: chr8:41577892-41601201(-) OLP: chr8:41577892-41601201(-)
|
| DB links |
Entrez 18983
MGI 1298230
Ensembl ENSMUSG00000031601
Vega OTTMUSG00000026076
|
| Feature | protein-coding |
| GO_BP |
-
 6 Terms
nuclear-transcribed mRNA poly(A) tail shortening (GO:0000289)
deadenylation-dependent decapping of nuclear-transcribed mRNA (GO:0000290)
transcription, DNA-dependent (GO:0006351)
regulation of transcription, DNA-dependent (GO:0006355)
cytoplasmic mRNA processing body assembly (GO:0033962)
positive regulation of transcription from RNA polymerase II promoter (GO:0045944)
|
| GO_MF |
-
3 Terms
|
| GO_CC |
-
4 Terms
|
| KEGG |
-
1 Terms
|
| Ver2_FPKM |
see DBTMEE:2004868 (v2.0)
|
| SPR_Histone_Erkek_5KaroundTSS |
N/A |
| SPR_Histone_Erkek_2KaroundTSS |
N/A |
| SPR_Methy_Kobayashi_5KaroundTSS |
N/A |
| SPR_Methy_Kobayashi_2KaroundTSS |
N/A |
| SOLiD_OocyteTo4C_FPKM_gene_guided |
| DBTMEE | Gene | RefSeq | Entrez | SPR_FPKM | Oo_FPKM | 1C_FPKM | 2C_FPKM | 4C_FPKM | MEF_FPKM |
|---|
0004941
(v1.0) | Cnot7 | NM_011135 | 18983
| 110.338 | 118.554 | 33.1007 | 22.0435 | 10.6097 | |
|
| SOLiD_Illumina_Oo_1C_Sperm_FPKM_gene_guided |
| DBTMEE | Gene | RefSeq | Entrez | Oo_FPKM | SPR_FPKM | 1C_FPKM |
|---|
0004941
(v1.0) | Cnot7 | NM_011135 | 18983
| 115.369 | 3.91078 | 129.345 |
|
| SOLiD_Partheno1C_FPKM_gene_guided |
| DBTMEE | Gene | RefSeq | Entrez | Oo_FPKM | 1C_FPKM | p1C_FPKM |
|---|
0004941
(v1.0) | Cnot7 | NM_011135 | 18983
| 112.611 | 117.364 | 103.002 |
|
| SOLiD_Illumina_Oo_p1C_Sperm_FPKM_gene_guided |
| DBTMEE | Gene | RefSeq | Entrez | Oo_FPKM | SPR_FPKM | p1C_FPKM |
|---|
0004941
(v1.0) | Cnot7 | NM_011135 | 18983
| 115.436 | 3.85722 | 112.969 |
|
| SOLiD_Partheno4C_FPKM_gene_guided |
| DBTMEE | Gene | RefSeq | Entrez | 2C_FPKM | 4C_FPKM | p4C_FPKM |
|---|
0004941
(v1.0) | Cnot7 | NM_011135 | 18983
| 30.6461 | 21.2838 | 18.738 |
|
| Illumina_Oo_2C_FPKM_gene_guided |
| DBTMEE | Gene | RefSeq | Entrez | Oo_FPKM | 2C_FPKM |
|---|
0004941
(v1.0) | Cnot7 | NM_011135 | 18983
| 81.317 | 42.1204 |
|
| SOLiD_SC_Oo_REPLICA_FPKM_gene_guided |
| DBTMEE | Gene | RefSeq | Entrez | Oo_1_1 | Oo_2_1 |
|---|
0004941
(v1.0) | Cnot7 | NM_011135 | 18983
| 76.5405 | 154.395 |
|
| NIA60mer |
| DBTMEE | Array_Feature_Number | Oligo_Parent_Clone | Unigene | Gene | Entrez | U_Cluster | NAP_Cluster | Gene_U/NAP | TIGR | SwissProt | EST | Oo | 1C | 2C | 4C | 8C | Morula | Blastocyst |
|---|
0004941
(v1.0) | 5297 | AF071431.1 | Mm.220129 | Cnot7 | 18983
| U029751 | NAP109305-1 | Cnot7; | TC929812,TC929807,TC929806,TC929805,TC929803,TC929802,TC929800,TC929799,TC929798,TC929797,TC929796,TC929794,TC929793,TC929792,TC929790,TC929786,TC929784,TC929783,TC929781,TC929778,TC929777,TC929775,TC929769,TC929763,TC929759,TC929756,TC929747,TC929741,TC9 | Q60809 | U,F,2 | 3.4804 | 3.1497 | 3.147 | 3.1291 | 4.5509 | 3.786 | 4.3446 |
0004941
(v1.0) | 8133 | H3060D01-3 | Mm.206770 | Cnot7 | 18983
| | | Cnot7 | | | | 4.0665 | 4.0361 | 3.2665 | 2.9868 | 2.5461 | 2.7498 | 2.6346 |
|
| MOE430 |
| DBTMEE | Probe_ID | Unigene | Gene | RefSeq | Entrez | Oo | 1C | 2C | 8C | Blastocyst |
|---|
0004941
(v1.0) | 1460665_a_at | Mm.272551 | Cnot7 | NM_011135.4 | 18983
| 568.85 | 1312.47 | 646.8 | 103.925 | 52.4 |
0004941
(v1.0) | 1423641_s_at | Mm.272551 | Cnot7 | NM_011135.4 | 18983
| 2664.07 | 4135.52 | 2810.55 | 445.75 | 257.975 |
0004941
(v1.0) | 1430519_a_at | Mm.272551 | Cnot7 | NM_011135.4 | 18983
| 372.575 | 383.075 | 238.1 | 127.35 | 76.3 |
|
| Agilent44K |
| DBTMEE | Probe_ID | Gene | Acc | Entrez | Oo1_xFold | Oo1_pVal | Oo1_Flag | Oo2_xFold | Oo2_pVal | Oo2_Flag |
|---|
0004941
(v1.0) | A_52_P120958 | Cnot7 | NM_011135 | 18983
| 1 | 1 | P | 0.821 | 0.315 | P |
0004941
(v1.0) | A_52_P410732 | Cnot7 | NM_011135 | 18983
| 1 | 1 | P | 0.752 | 0.214 | P |
|
| Proteome |
| DBTMEE | Gene | Entrez | GV_seqCount | MII_seqCount | Zygote_seqCount | GV_specCount | MII_specCount | Zygote_specCount |
|---|
0004941
(v1.0) | Cnot7 | 18983
| 0 | 4 | 1 | 0 | 5 | 1 |
|
